| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3264 |
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| Symbol | |
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| ID | 5696127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3921262 |
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| End bp | 3924666 |
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| Gene Length | 3405 bp |
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| Protein Length | 1134 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641265884 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001531144 |
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| Protein GI | 158523274 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCG ACACACCCGC CCCTGTTACC ACCCGCCCTG AAAGTCCCTT TGGAAAGCGA
GGCCTTTTGT CCGGCCTGGC CGGTGTTCTG GCCCTGCTGC TGGTAGCCGG AGCCATGCTC
ATCTGGCAGA CGGTGCGCCA TGCAGACGGC AGCATGCGCG CCGACCTGCT GGAGCAGGCG
CGACTGGTGG CCGGCGCACT GGACCTGGAA AAGGTTCTGG CCCTTTCCGG CACTGCCGCC
GATCTTGAGG CCCCCGCCTA CCGGGATATC AAAAAGCAGC TGGGTGCCCT CCATCGCACC
CATGGCCGGG CCCGATTTAT CTATCTGCTG GGACAGCGGC CGGATGGGGG CCTGTTTTTT
CTGGCAGACA GCGAGCCTGC CGAATCACAA AATCTTTCCC CTCCGGGACA GCCCTATGAA
GAGGCGTCCG CCGGTCTGCT GCGCGTCTTT GCCACGGGAA CCGGAACCGT GGAAGGCCCT
GAGGCAGACC GCTGGGGCAC CTGGGTCTCC GCCCTGGTGC CGCTGTTCGA GCCGCAAACC
GGCCGGGTGG CGGCCGTGCT GGGAATGGAT GTGGACGCCC GCCGCTGGCA AGGGGCCGTG
CTGGCCGCGG CGGCATGGCC GTCGGTGCTG ACAGCGGCCT TGATTGCGTC CCTGGCCTTA
AGTTTCGCCC TGGCTGTCGC CCGTCGCCGG ACCCTGAATT TCCAGACCGA AATTGCCCGG
GCCCGGAAGC AGGCCGAACA GGCCGCAGCG GAAACCGAAA GAGAGCGCCG GCTGCTGCAA
ACGCTGCTTC ACGCCATACC GGCCCCGGTG TTTTTCAAGG ACAGAAACGG CCTTTACCTG
GGATGCAATC CGGCCTTTGA AGCCATAACC GGCAAAACCG AAGCAGAAAT CCTCGGCAAA
CGGCCCCATG AAATCTGGCC TGAAAATTAC AGTTCGACCT ATCGGGACAA AGATCTCGAA
CTTCTGAAGA CCGGCGGAAA GCAGCAGTAC GAATACCAGT ACGCGGGTCC GGACGGCACG
GCCCGGGATG TGGTGTTCTA TAAGTCCGCG TTCCAGGATT CGGCCGGCCG GGTGGACGGC
CTTGTGGGTG TGATGCTCGA CATCTCCGAG CGAAAGCAGG CCGAAGAAGC CCTGCGCGAA
AGCGAAAAAA AATACCGCGT GCTGATTGAC GGGTTGCCGG ACATCGTGAT GCGCTTTGAC
CGTGACGGGC GGCACCTGTT TGTGTCCGAT AACATCAGTG ATCTCATCGA CCTGCCGGCG
GCCCGGTTCA TCGGCAGGAC ACACCGCGAA CTGGATTTCC CGGAACCGGC GTGCCGTTTC
TGGGAAAAGG CCATCCAAGG CGTATTTGAC AGCAAAACGC CTTTTGAGAC CGAGTTCCGC
TTTCAGGGAA AACAGGGAGA GGTGGTTTTC AACTGGCGCC TGATCCCGGA ACAAGACGCC
CACGGGGAGA TTCGGTCCGT GCTCTCCTTC TGCCGGAACG TGACCGCACA TCGCAAGATC
GAACAGGACT ATCATACCCT GTTTCGCGAG ATGCTCGACG GCTTTGCCCT GCACGAAATC
ATCCGCGACG CCGCGGGCCG GGCGATTGAC TATCGGTTTC TGGCCGTCAA TCCGGCTTTT
GAGCGCATGA CCGGACTTGC GGCCAGGGAG ATTGTGGGCA AGACCGTGCT CGAGGTTTTG
CCGGACACCG AGCCGTACTG GATCGAAAGA TATGCCGGCG TGGCCGAAAC GGGGGACCCT
GTCTTTTTCG AGGAGCACGC CAGAGCGTTG GAAAAATACT TTGCGGTGAC GGCTTTTCGT
CCCGCGCCCA ACCAGTTCGC TTCCATCTTT CAGGACATCA CCGAACGCAA ACAGGCCGAG
GAGGCGCTAC GGAAAAACGA GGAACGGTAC CGATCCGTCC TGGACAATAT TGAAACCGGT
TACTATGAAG TGGATCTGGC CGGAAACCTT ACCTTCTTCA ACCCGTCTCT GTGCAAAATT
CTGGGTTATC CAAGTGACGA GGCCATGGGC ATGAATTACA AAAAATATAT GGCCCCGGAA
ACCGCTAAAA AAGTGTTTCA AATATTCAAT CACGTATTTA GAACCGGAGA AACGGATAAA
TCCTTTGAGT GGACCCTTAT AAAGAAAAAC GGGGAAAAAT GCCATGTGGC CACCTCTATT
TCCTTAATGA GAGACACCGA CGGCAACCCG ATCGGTTTTC GGGGAATTGA GCGCGATATC
ACCGAACACA AACAGGCCGA GGCCGAGAAG GAAAAACTTT CGGCCCAGTT GATCCAGGCG
CGGAAAATGG AGGCCGTGGG CCGCCTGGCC GGGGGCGTGG CCCATGATTT TAACAACATG
CTCAATGTTA TCGTGGGCCA CGCGGAACTG GCCCTGGACG AGACAAGGCC GGATGACCCG
GTTTGTGAAA CCCTCAATGA AATTCTGGGC GCGGCCCGCC GCTCCGCCGA GATCACCCGC
CAGCTTCTGG CCTTTGCCCG CAAGCAGACG ATCCACCCCC GGGTGCTGGA CCTGAACGCC
ACCATGGGGG ACAGACTCAA GGTGCTGCAA CGGCTTCTCG GCGAGGATGT CGACATGGCC
TGGACCCCCG GACCGGACCT GTGGCCGGTT CGAATGGACC CCTCCCAGAT TGACCAGGTG
ATGGCCAACC TCCTGGACAA CGCCCGGGAC GCCATCGACG GAGTGGGCCG CGTTGAGATT
GAAACAGACA ATGTCCGGCT CGGCCCGTGG GACTGCGTGG ACTGCCCCGG CCTGGTGCCC
GGTGAATACG TGCGGCTCTC TGTTCGCGAC ACCGGCCGGG GCATGGACAG AAAAACCCTG
GACAACCTGT TTGAGCCTTT TTTTACCACC AAGGGCGTGG GCGAAGGCAC CGGCCTGGGT
CTGGCCACGG TTTACGGCAT CATCAAGCAA AACAACGGAT TCATCTACGC GGCCAGCCGG
CCCGGACAGG GCACCGCCTT TACCGTCTAT CTTCCCCGCC ACGCGGGCGC GCCGGAACCG
GCCCCATCCG CCAAAGGGCA AAAAGCCCCG GCCGCCAGCG GCGGAACCGT GCTGGTGGTG
GAAGACGAGG CCTCGGTGCT GAAGCTTGTT CAAAGAGTAC TGGAGCGGCT GGGCTATAAC
GTGCTGACGG CCCTCGGTCC GGCCCGGGCC ATAACAATGG CGGACGAACA TCAGGGCACC
ATTGACCTTC TGATCACCGA TGTGATCATG CCGGAGATGA GCGGCCGGGA CCTGGCGAAA
ACGATGAAAA AGCGGTTTCC GGATCTTCGG GTGCTCTACA TGTCCGGCTA CACGGCCGAT
ATCATCGGCC GGCGGGGAGA GCTGGAAGCC GATGTGAACT TTATTCAGAA GCCTTTTTCC
AACCAGGACA TGGCGGAAAA GGTGAGAGAC GCGCTGAAGG AATAA
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| Protein sequence | MTTDTPAPVT TRPESPFGKR GLLSGLAGVL ALLLVAGAML IWQTVRHADG SMRADLLEQA
RLVAGALDLE KVLALSGTAA DLEAPAYRDI KKQLGALHRT HGRARFIYLL GQRPDGGLFF
LADSEPAESQ NLSPPGQPYE EASAGLLRVF ATGTGTVEGP EADRWGTWVS ALVPLFEPQT
GRVAAVLGMD VDARRWQGAV LAAAAWPSVL TAALIASLAL SFALAVARRR TLNFQTEIAR
ARKQAEQAAA ETERERRLLQ TLLHAIPAPV FFKDRNGLYL GCNPAFEAIT GKTEAEILGK
RPHEIWPENY SSTYRDKDLE LLKTGGKQQY EYQYAGPDGT ARDVVFYKSA FQDSAGRVDG
LVGVMLDISE RKQAEEALRE SEKKYRVLID GLPDIVMRFD RDGRHLFVSD NISDLIDLPA
ARFIGRTHRE LDFPEPACRF WEKAIQGVFD SKTPFETEFR FQGKQGEVVF NWRLIPEQDA
HGEIRSVLSF CRNVTAHRKI EQDYHTLFRE MLDGFALHEI IRDAAGRAID YRFLAVNPAF
ERMTGLAARE IVGKTVLEVL PDTEPYWIER YAGVAETGDP VFFEEHARAL EKYFAVTAFR
PAPNQFASIF QDITERKQAE EALRKNEERY RSVLDNIETG YYEVDLAGNL TFFNPSLCKI
LGYPSDEAMG MNYKKYMAPE TAKKVFQIFN HVFRTGETDK SFEWTLIKKN GEKCHVATSI
SLMRDTDGNP IGFRGIERDI TEHKQAEAEK EKLSAQLIQA RKMEAVGRLA GGVAHDFNNM
LNVIVGHAEL ALDETRPDDP VCETLNEILG AARRSAEITR QLLAFARKQT IHPRVLDLNA
TMGDRLKVLQ RLLGEDVDMA WTPGPDLWPV RMDPSQIDQV MANLLDNARD AIDGVGRVEI
ETDNVRLGPW DCVDCPGLVP GEYVRLSVRD TGRGMDRKTL DNLFEPFFTT KGVGEGTGLG
LATVYGIIKQ NNGFIYAASR PGQGTAFTVY LPRHAGAPEP APSAKGQKAP AASGGTVLVV
EDEASVLKLV QRVLERLGYN VLTALGPARA ITMADEHQGT IDLLITDVIM PEMSGRDLAK
TMKKRFPDLR VLYMSGYTAD IIGRRGELEA DVNFIQKPFS NQDMAEKVRD ALKE
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