Gene Dole_3248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_3248 
Symbol 
ID5696111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3892085 
End bp3892939 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content63% 
IMG OID641265868 
Producthypothetical protein 
Protein accessionYP_001531128 
Protein GI158523258 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0063] Predicted sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGCTG TCGTCGGAAC CGTACCGGAC ATAAATTTCC CCCTGACCCA CGGGCCGGTA 
AGCCTTTGCG AAGACCAGCT GGCCATTGGC GGCCGAACCG TTCCCGTTCA TCGGGGCACC
CCGGCCCTGC TGGCAGCCGC GGCCAGAGCC GCGGAGGTCC TGGCCGGACC GACAGTTTAC
GCCTTTCTGG CCGGCGACAT CGGCCGGGGT CACGGCAGCC GGGAGATCTA CCGGTTTCTG
GAAGAAAACC TTTCCGACTT TGATCTTTCT GTGCTCACCT TTCACTATCT TCAACCCGAT
GTGGACTGGC ACAACCGGGT GCTGTTTGCC GTGGACGCGC TGGCATGCCG GCCCCTGCTG
ATCGCTGACG CGGGCTTCAT GTACGCGGCC AAAATGAGCG GCCAGGCCCC ACGCTACGAC
ATTTTTACCC CGGACGCCGG AGAGCTGGCC TTTCTGGCCG ACGAGGCCGC GCCCCACCCT
TTTTACACCC GGGGCTTTAT TCTGCACACG GACAACAAAA CACCCGACCT GATCGCCCGA
GCCTGCGAAC ACGCCAATGC CGCCACCCAC CTTGTAGTAA AAGGCCAAAC CGACTATATT
GTTAAAAGCG GATCGATCCT GGCCACGGTA GACAGTCCTT CCGTTTCGGC CATGGAGGCG
GTGGGCGGTA CAGGTGACAC CCTGACCGGC CTGATCTCAG TGCTGTGCTG CGCCGGGTTT
TCCCCGGAAA AAGCCGGGAT CACGGGGGCC GTGGCCAACC GGTGGGCCGG GGTTTACGCC
CATGCCACGC CGGCCACCCA GGCGGCGGAG CTGGTTGCGG CGATACCAAA GGCGCTGGAA
GAGGTGTTGC TTTAA
 
Protein sequence
MLAVVGTVPD INFPLTHGPV SLCEDQLAIG GRTVPVHRGT PALLAAAARA AEVLAGPTVY 
AFLAGDIGRG HGSREIYRFL EENLSDFDLS VLTFHYLQPD VDWHNRVLFA VDALACRPLL
IADAGFMYAA KMSGQAPRYD IFTPDAGELA FLADEAAPHP FYTRGFILHT DNKTPDLIAR
ACEHANAATH LVVKGQTDYI VKSGSILATV DSPSVSAMEA VGGTGDTLTG LISVLCCAGF
SPEKAGITGA VANRWAGVYA HATPATQAAE LVAAIPKALE EVLL