| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3239 |
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| Symbol | |
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| ID | 5696102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3883103 |
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| End bp | 3884548 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641265859 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001531119 |
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| Protein GI | 158523249 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCATTC GTCTGGTGCT GGCCATCAAG AACCGTAACC TTCAGACCTA CATGGACAAG
CAGTTTCAGC AGTTTGATGA CGTTCAGGTG GAAACCTGCG GGGACGCGAA AAATCCCTGG
CAGCGGGTGA TCCGCAGCTG CGGCGACATC CTCGTGGTCA GCGCCTCCTT TATGCCGGCC
CAGATCGAAT CCAGCATTGC CATGCTGAAC GAACTGCCCG AAACCCCCAC CACGGTGGTC
CTGCACAACA GCGATTCTTC CGAGGAGCAT GCCCAGTTGG TGGGGGCCGG CGCCGACGTG
GTGCTGTATG ACGGCATCTC CCGAAAAAGC CTGATCGAGG CCATTGAGTC CACGTTAGAG
TCCCGGCGCC AGCTGATTCA GAAGACCCGT CTCACGGCCC GGGGCCAGGC TTCGCCCAAG
CTGGGGGATT TTATCTCCCA GAGCCAGAGC ATGCAGTTGC TGATGGAGGA CGTGTGGAAG
GTGATTCCCA GCAATGCCCC GCTTCTGGTC CTGGGTGAGA CCGGGGTGGG AAAGGAGCAC
CTGGCCCGGG CCATTCACTC GGAAAGCCCC CGGTCGGCCG GGCCCTTTAC CGCGGTGAAC
GCGGCGGCCC TTCAGGAGCA GTTGCTGGAA AGCGAACTGT TCGGTCACGA AGAGGGGGCT
TTTACCGGCG CCATCCGGTC CCGGCGGGGA GCCTTTGAAA TGGCCCACGG CGGCACCATT
TTTTTAGATG AAATCGGCGA AATGCCGCTC CATCTTCAGG CCAAGCTGCT GCGGGTTTTG
CAGGACTACG AGATTCGGCC CGTGGGCAGC GAACGTTCCA CCTGGGTGGA CATTCGGGTG
ATCGCCGCCA CCAACCAGGA CCTGGCCCTG GCAGTGGAAA AGCAGACCTT TCGAAAAGAC
CTGTTTTACC GGCTGGGCGT GATCACCCTG ACCATTCCGC CGCTGTCGGA CCGCAAGGAG
GACATTCCCG GCATGGTCCA CCGGTTTATC GAACACTACC AACTCAAGAT CGGCAAGGAG
ATTCGGGGGG TCACCGAGGC GGCCATGGCG GCCCTGTGCC AGTACGAGTG GCCGGGCAAC
GTGCGGGAGC TGATGAACGT GATTGAGCGG GCCATTCTGC TCTGCCCGCA GGAGATCATA
GGCATTGAGG ACCTGCCCTA CATTTTTAAT TCCCCGGCGG CCCTTTCAAA GGACGCCATG
ACCCAGGGGG CTCTGGATCC GGCCGCGTGG AAGGGCAAGA CCCTGCCCCA GGTGCGCCAG
GAGGTGATGG ATCGGGTGGA GCAGGCCTAC CTTCAGATGG TGTTAAGGGA GACCCGGGGC
CGGGTGGGCG AGGCGGCCAG AATGGCGGGC ATTCATACCC GGGCCCTGTA TAACAAGATG
CAGCGCCTGG GTATTGACAA AAACCGGTTC AAGGCGGCCG GAAAAGAAGA GGCAAAACTT
CTGTAA
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| Protein sequence | MLIRLVLAIK NRNLQTYMDK QFQQFDDVQV ETCGDAKNPW QRVIRSCGDI LVVSASFMPA
QIESSIAMLN ELPETPTTVV LHNSDSSEEH AQLVGAGADV VLYDGISRKS LIEAIESTLE
SRRQLIQKTR LTARGQASPK LGDFISQSQS MQLLMEDVWK VIPSNAPLLV LGETGVGKEH
LARAIHSESP RSAGPFTAVN AAALQEQLLE SELFGHEEGA FTGAIRSRRG AFEMAHGGTI
FLDEIGEMPL HLQAKLLRVL QDYEIRPVGS ERSTWVDIRV IAATNQDLAL AVEKQTFRKD
LFYRLGVITL TIPPLSDRKE DIPGMVHRFI EHYQLKIGKE IRGVTEAAMA ALCQYEWPGN
VRELMNVIER AILLCPQEII GIEDLPYIFN SPAALSKDAM TQGALDPAAW KGKTLPQVRQ
EVMDRVEQAY LQMVLRETRG RVGEAARMAG IHTRALYNKM QRLGIDKNRF KAAGKEEAKL
L
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