| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3231 |
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| Symbol | |
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| ID | 5696094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3874437 |
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| End bp | 3875759 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641265851 |
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| Product | MiaB-like tRNA modifying enzyme YliG |
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| Protein accession | YP_001531111 |
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| Protein GI | 158523241 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.12995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTAC ACCTCACCAG CCTTGGCTGC GCCAAGAACC AGGTGGACAG CGAGCTCATG
CTGGGGGCCT TTGCCGCCGA AGGGCTTACT GTCTGCGATG ATCCGGCAGG GGCCGATGTG
CTGGTGGTCA ATACCTGCGC CTTTATTGAA GATGCGGTCA ACGAGGCGGT GGACACCATT
CTGGCCCTGG CCCGGTATAA AAGCGAGGGT TCATGCCGCC GCCTGATCGT TTGCGGCTGC
CTGCCGGAGC GCTTTGGGGA AGAGCTGGCC GGGGCCCTGC CCGAGGCAGA CTTTTTTTTC
GGCACCGGCG CCTACCACCG GGTGATTGAG GCCGTGGCCG GCAAAGAGAG CACACTTTCC
CGGTGCACCC TGCCACCGCC GGACGCGGTG CCCATGCAGG CCGCCGCTGA CCGGAGAATC
TGCGCCACGC CCCACACCGT TTATGTAAAG ATCGCCGAGG GGTGTGACCG GCGCTGCACC
TACTGCATCA TTCCCCGGCT GCGGGGCCGC CAGCGGAGCC GGCCCCCGGC CGACATCGTG
GTCGAGGCCC GGGGCCTGGT GGCCGCCGGT GCAAAAGAGC TCGTACTGGT GGCCCAGGAG
ACCACGGCTT ATGGAGCCGA CCTCTCCCCC CCGGTATCGC TGGCATCCCT GCTGATGGCG
CTTTCCGACG CCGTGGGCGA CATCTGGGTC CGGGTGCTTT ATATGCACCC CGACACCATG
GACCCGGACC TGATTCGCGT GATGACGGAA CGGGACAACC TCTGTTCCTA TTTTGACGTG
CCGGTGCAGC ACGCCAGCGA CCGGGTGCTC AAGCGGATGG GCCGGCGCCA CACCGCCGCT
GACCTGCACC GGCTGTTTGA CGACATTCGA AGGGCGGATC CGGACGCGGT GCTGCGCACC
ACGGTCCTGG TGGGATTTCC CGGCGAGAAG CCCGCCGATT TTGAAAAACT GCTTGATTTT
ATCACTGGCG TCGCGTTTGA TCATCTGGGC GCGTTTATCT ATTCGGATGA CGAGGCCCTG
TCCTCCCATG GACTGGACGG TCACGTGTCG TCAAAAACGG CCCGGCACCG GTACGATCGG
GTGATGACGG CCCAGATCGA TATATCGTCC CGGCGCCTGG CAAAACGGGT CGGCAGCCGC
GAACCGGTGC TGGTGGAGGA AAAGGCGGAG GACGGCCTGT TTTTCGGCCG GGCCTGGTTC
CAGGCCCCTG AGGTGGACGG TGATGTCTGT TTTTCCGGTG CCGGTGATTA TGCCCCGGGT
GACCGGGTGT CCGTACGCAT CACCGGGGCG TCCGCGTATG ACCTGACAGG AGAAGCACAA
TGA
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| Protein sequence | MKVHLTSLGC AKNQVDSELM LGAFAAEGLT VCDDPAGADV LVVNTCAFIE DAVNEAVDTI
LALARYKSEG SCRRLIVCGC LPERFGEELA GALPEADFFF GTGAYHRVIE AVAGKESTLS
RCTLPPPDAV PMQAAADRRI CATPHTVYVK IAEGCDRRCT YCIIPRLRGR QRSRPPADIV
VEARGLVAAG AKELVLVAQE TTAYGADLSP PVSLASLLMA LSDAVGDIWV RVLYMHPDTM
DPDLIRVMTE RDNLCSYFDV PVQHASDRVL KRMGRRHTAA DLHRLFDDIR RADPDAVLRT
TVLVGFPGEK PADFEKLLDF ITGVAFDHLG AFIYSDDEAL SSHGLDGHVS SKTARHRYDR
VMTAQIDISS RRLAKRVGSR EPVLVEEKAE DGLFFGRAWF QAPEVDGDVC FSGAGDYAPG
DRVSVRITGA SAYDLTGEAQ
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