| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3208 |
|---|
| Symbol | |
|---|
| ID | 5696070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 3843057 |
|---|
| End bp | 3845456 |
|---|
| Gene Length | 2400 bp |
|---|
| Protein Length | 799 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641265827 |
|---|
| Product | organic solvent tolerance protein |
|---|
| Protein accession | YP_001531088 |
|---|
| Protein GI | 158523218 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1452] Organic solvent tolerance protein OstA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAT TGACACCACG GTCCGGCAGC CAAAAGAGGC TGATCTTCCA CCCAAAAAGA
AAAAATCATG ATGCAGGGCA ACGGTTTTTC GTGCCAGGCG TCATGAAATT TTTTTTGTGG
TGGGCGATTG CCGCCGCTCT CCTGTCAGGG TACGGGCATG AGGCCTGGGC AGCGGACACG
GCCGGCGACC TTTTCCGCAT GGACCCGAAA AGCGCCTGGC GCATTGACGC CGGGGCCATC
ACCTATGACA AGCAGGCCGA TCTCTACCTG GCGGTGGGAA AGGTGACCAT CACCAAGGAG
GGCAAGCGGA TTGTCGCGGA CAGTATCTGG TTTGACCAGA AAAACCAGCG CCTTTTTGCC
GACGGTAACG TGACCATGAC CGCCGGGCCG GATGTGCTTT CCGGGGACCA CATGGAGATG
GACATGGCCG CTGAAACCGG CACCATCTCC AACGGCACCG TGTTCCTGGG AGACCGCCAT
TTTTACATTA TCGGCGACAC CATTCAAAAA ACCGGGCCGG ACACCTACAC CGCCGACCGG
GTGAGCTTCT CCTCCTGTGA GCCGGGAAAC CCGGACTGGC AGATCACCGG TCAAGACCTT
CGCCTCACCG TGGAGGGCTA CGGCTCCCTG CGCCACGCGG CCCTGTGGGC CCGGTCCATG
CCGGTGCTGT ACACGCCCTA CCTCTTTTTC CCGGTGAAAA TCAAGCGACA GACCGGTTTT
CTGGTGCCCC GGGTCAGCTA TTCGGACAGA AAATGGGAAG AGATCGAGCA GCCCTTCTAC
TGGGTGATCA GCGACAGCGC GGACATGACC TTTTACGCCC ATCACATGGG CCGGAGGGGC
GAAAAACTGG GGTTTGAGTA CCGCCAGGTG ATGGACGCAA CATCCCGGAC CACGCTCATG
TTTGATTTTC TGGAGGACCG CAAGGCCAAC ACCGATCCCG GGCAGGACTG GGCATACACC
CATGACAGGT GGCTTCGCCC CAACAACGAC CGGTACTGGC TGCGCATGAA ACACGACCAC
GGCCTGGGGC CCGGCCTGTC GGCCAAACTG GACATCGACC TTGTCAGCGA CCAGGACTAC
CTGCTGGAAT TCGAAAGCGG ATATACCGGG TTTGACGCGG CGGACCGCTA TTTTGAAAAG
GTCTTTGGCC GGGACCTGGA CGACGCCGAC AACCCGGTGC GCACCAGTAT CTTCAATCTT
CAGAAAAACT GGACCCAGAA CAGCCTCAAC GCCGGGGTGC GGTGGGATGA TGACGTGATC
AAGCGGCGAT GGGCCGACGA AGACGACACC GTTCAGCGGC TGCCCGTGGT CTCATTTGAC
GCCAATAAGC AGAAACTCGG CGCAACTCCT CTTTTTTACG AATTAAACAG CGAATACCTG
TACGGCTACA CAGAAGACAG CCTGCGGGGC CACCGGGCCG ACATGCACCC GCGAATTGCT
CTGCCCGGCC GGTTTAAAAA CTTTTTTTCA TTTGAACCGT CGGTGGGCTT TCGGGAGACC
GTGTGGCGCA TGGACCGGGA TGCCGGGGCC AATGACACGG ACCACACCCA ATCCCGTGAA
CTGTTCGACC TTCGGGCCGA CCTGTCCTCC GAACTGTACA GGGTGTTTGA CGTAAATCCC
GAAACCGGGA AGCGGGCCTG CCACACCATT GTGCCCCGGC TGGAATATGA ATATGTGCCG
CACAAAAACC AGGACGACTA CCCCCGGTTC ACCGACGCGG CCGATGTCAT TGAAAAACAG
AACACCGTCA CCTGGTCGGT CACCAACCTG CTGACCGTAA AGGAGTGGCG GGGCGCGGCG
CCTTCGGCTG CCGACGCCCT GGAAACAGCG GAAGCCGCTT CCCCGCCCCT GGTAAGGGAC
GCCCTCTACA GAGAAGTGGT CCGGCTCAAG GTCTCCCAGA GCTATGACAT CAACGAAGCC
AAAGAGGACG ATCCGGCCCA ATGGGCAAGC CCGGACCAGC GCCGGCCCTT CTCCCCGGTG
GCAGTGGAGC TGGACGCCCG TCCCGCAACC TCGGTGCGGC TGGATGGTGA CGGCCTGTGG
TGCCCCTACA CCGGCGAATG GCAGGCCTAT AACGGCGAGG TTGCCTTAAG CGATGCCAGG
GGGGACAAAT TTTCCGGGGG CTACCGGTAC CGGCAGGGAG TGTCCGAGTC GGTCTACGGC
AAGGCGGCCC TGGAGGTAAA CGAGGCGTTT CTGCTCTATG GCGAGTATGA GCGCAACATC
TTCAGCGGCA CGGATATTCT GGTCCAGACC GGCGTGGTCT ACCGGGCCTC CTGCTGGTCG
GTGGACGTGA ACTACACCGA TGAACCCGGA GACCGCACCT ACACCGTGAT GATCAATCTT
TACGGCCTGG GCGAGTTCGG CACTGATATT TCCGGCGCCG ATGTTGAACA GTATCCCTGA
|
|---|
| Protein sequence | MKPLTPRSGS QKRLIFHPKR KNHDAGQRFF VPGVMKFFLW WAIAAALLSG YGHEAWAADT
AGDLFRMDPK SAWRIDAGAI TYDKQADLYL AVGKVTITKE GKRIVADSIW FDQKNQRLFA
DGNVTMTAGP DVLSGDHMEM DMAAETGTIS NGTVFLGDRH FYIIGDTIQK TGPDTYTADR
VSFSSCEPGN PDWQITGQDL RLTVEGYGSL RHAALWARSM PVLYTPYLFF PVKIKRQTGF
LVPRVSYSDR KWEEIEQPFY WVISDSADMT FYAHHMGRRG EKLGFEYRQV MDATSRTTLM
FDFLEDRKAN TDPGQDWAYT HDRWLRPNND RYWLRMKHDH GLGPGLSAKL DIDLVSDQDY
LLEFESGYTG FDAADRYFEK VFGRDLDDAD NPVRTSIFNL QKNWTQNSLN AGVRWDDDVI
KRRWADEDDT VQRLPVVSFD ANKQKLGATP LFYELNSEYL YGYTEDSLRG HRADMHPRIA
LPGRFKNFFS FEPSVGFRET VWRMDRDAGA NDTDHTQSRE LFDLRADLSS ELYRVFDVNP
ETGKRACHTI VPRLEYEYVP HKNQDDYPRF TDAADVIEKQ NTVTWSVTNL LTVKEWRGAA
PSAADALETA EAASPPLVRD ALYREVVRLK VSQSYDINEA KEDDPAQWAS PDQRRPFSPV
AVELDARPAT SVRLDGDGLW CPYTGEWQAY NGEVALSDAR GDKFSGGYRY RQGVSESVYG
KAALEVNEAF LLYGEYERNI FSGTDILVQT GVVYRASCWS VDVNYTDEPG DRTYTVMINL
YGLGEFGTDI SGADVEQYP
|
|---|
| |