Gene Dole_3206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_3206 
Symbol 
ID5696068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3841602 
End bp3842600 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content62% 
IMG OID641265825 
ProductDNA polymerase III, delta prime subunit 
Protein accessionYP_001531086 
Protein GI158523216 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAGG AAAAGCCCCT GCGGACCCTT GCCGGCATTC TTGCCAGAGG CGATATTCCC 
CACGCATTTC TCTTTACCGG CATTGACGGC ATTGGAAAAC GCAGCGCCGC CATGGGTTTT
GCCATGGCGT GCAACTGCCT TGCCGCCGTC CAGGAAAAGC CCCTGCCGGT GCCCGTTCCC
GGCGACAGCG GGCTTCCCTT TTGTGGTACC TGCCGAATCT GCCGGGCCAT TGCCGCAGGC
ACCCATCCGG ACGTGATCAC TATCGCGCCG GAAGGAAATG CCATCAAAAT CGGCCGCATT
CGGGAGTTGA TCGAAAAGGT GGCCTTCCGG CCCCACGAGG CAAAAATGCG GGCCGTGATT
ATTTCCGACG CCTGGGCCAT GAACCCTGAG GCCGCCAACG CCCTGCTCAA GTCCCTGGAA
GAACCGCCGC CGCAAACCCT TTTTTTTCTG ACCGCCGAAC ACGCGTCCGA TCTGCTGCCC
ACCGTGGTCT CCCGTTGCCG TCACATCCGG TTTGCCCCGG TATCCGCCGA TCGCATCGCA
GCCTTTCTGC AGCAGCACCA CGGCGTGGAC GAAAAAGCGG CCCGGTCGGC GGCCCTGATG
TCCGGCGGCA GCGTGGCCAG GGCACTGGCC CTGACCGACG TGCCCCTGGG CGCGTGGCGG
CAATGGCTGG CCGCTGAACT GGCGGCCCTG CCGTCACGTC CGGTGCCCCT GGTGCTGGCC
TTTGCGGAAA AGCTGCAGAA GAACAAAGAC CAGATCGGTC AGTGGCTGGG CATGATACAG
ACCTGCCTTT ATGACGCGGT GGTATGGAAA TACCAGCCCG GCCGCATTAT GAACATTGAC
ATGACCGACG CTGTGGCAGC CCTGTCAGAG CAGGAGAGCA TCGCCTCTCT GGGCCGAAAA
ATTGACGCCG TGGTGGCAAT GGAAAAGGCG CTGAACCGCA ATTTAAACCC CCGACTGGCC
ACGGAAAAAC TGGCCCTGGA GCTGGCAAAC CGATTATGA
 
Protein sequence
MDQEKPLRTL AGILARGDIP HAFLFTGIDG IGKRSAAMGF AMACNCLAAV QEKPLPVPVP 
GDSGLPFCGT CRICRAIAAG THPDVITIAP EGNAIKIGRI RELIEKVAFR PHEAKMRAVI
ISDAWAMNPE AANALLKSLE EPPPQTLFFL TAEHASDLLP TVVSRCRHIR FAPVSADRIA
AFLQQHHGVD EKAARSAALM SGGSVARALA LTDVPLGAWR QWLAAELAAL PSRPVPLVLA
FAEKLQKNKD QIGQWLGMIQ TCLYDAVVWK YQPGRIMNID MTDAVAALSE QESIASLGRK
IDAVVAMEKA LNRNLNPRLA TEKLALELAN RL