Gene Dole_3194 details

Gene Information

• Locus tag: Dole_3194
• Symbol: thrS
• ID: 5696056
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 3826390
• End bp: 3828303
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 641265813
• Product: threonyl-tRNA synthetase
• Protein accession: YP_001531074
• Protein GI: 158523204
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCACCA TCACGCTTCC CGACAGCAGC ACGAAAACCT TTGACGGTCC GGTGACGGGA 
GAACAGATAG CAAAAAGCAT TTCAGAAGGT CTTTGGCGGG AGTGCGTGGC CGTTGAGGTG 
GACGGCGCGG CCATGGACCT GTCCGAACCC ATTGCCACCG ACGCCGCGGT CCGGCTGATC 
ACCACCCGGG ACCCGGAGGG GCTGCACATC ATGCGCCACA GCGCGGCCCA TGTCATGGCC 
GAGGCCGTGC AGAGAGTTTT TCCCGATGCC GAGCTGACCA TCGGCCCGGT GGTGGAGGAC 
GGGTTCTATT ACGACATCGA CATGGAGCCG GTGTCCGAGG AGATCTTTTC CAGGGTGGAG 
GCTGAGATCA AAAAGATCGT TTCAGCCAAA ATCCCTTTTG TCCGCAAAGA GGTGGACAAG 
GCCGAGGCCC TGGATCGTTA CAGGGACCAG CCCTACAAAA CAGAAATTCT CAACGAGATC 
GAAGACGACA CGGTATCGCT GTACACCAAC GGCGACTTTA CCGACCTGTG CCGGGGACCC 
CATGTACCCC ACACCGGGTT TGTGCGGGCC GTGAAATTGA CCAAGATATC CGGGGCCTAC 
TGGCGGGGAG ACCAGAACCG GGAGCAGCTG CAGCGGCTTT ACGGCACCGC CTTTTTCTCC 
AAAAAGGAGC TGGACGCCTA CCTGACCCTT ATCGAAGAGG CCAAAAAAAG GGACCACCGC 
AAGCTGGGGG CCGAACTGGA CCTGTTCAGC TTTCACGAAG AGGCTGCGGG CATGCCCTTT 
TTTCACCCCA ACGGCATGAA GCTGTGGAAC GCCCTGCTGG ACTACTGGCG CCTTGAACAC 
CGGGCCGCCG GCTACGTGGA GGTGAAGACC CCTGTAATGC TGGACCGGGC CCTGTGGGAA 
AAAAGCGGCC ACTGGGAAAA CTACCGGGAA AACATGTACG TGTCGGTCAT TGACGACAAC 
CAGTACGCCA TTAAGCCCAT GAACTGCCCC GGCGGCATGC TGCTTTACAA GGAGAAACGC 
TACTCCTACC GGGACCTGCC CCTGCGGGTG GCCGAAATCG GCCTGGTGCA TCGGCATGAG 
CTCAGCGGCG TGCTCTCCGG CCTGTTCCGG GTCCGGGCCT TTCACCAGGA CGACGCCCAT 
ATCTTCATGA CGCCGGACCA GATCGAGCAG GAGATTTTCG GGGTGCTCAA GCTGGTGGAG 
ACCATCTACA GCACCTTTGG CCTGGGCTTT CACCTGGAGC TCTCCACCCG GCCGGCCAAG 
TCCATCGGCA CGGACGAACA GTGGGTAAAA GCCACAGCCG GCCTGCGGGC CGCCCTGGAC 
GCCTACGGCA AAGGGTACGC GGTCAACGAG GGAGACGGTG CCTTCTACGG CCCCAAGATC 
GACGTGCACA TCAAGGACGC CCTGGGCCGG ACCTGGCAGT GCGGCACCAT TCAGCTGGAC 
ATGTCCCTGC CGGAGCGGTT CGACCTCTCC TATATCGACG CGGGCAGTGA AAAGCAGCGG 
CCCGTGATGA TTCACCGGGT GATCTACGGC TCCATTGAGC GGTTTTTAGG CATTCTCATT 
GAGCACTTTG CCGGAAAGTT CCCGCTGTGG CTGGCGCCGA CCCAGGCCGT GCTGCTGCCC 
CTCAATGACG ACATGATTCC CTATGCCCGC GAGGTGCGGC AGGAGTTTGA ACAGGCCGGC 
ATTCGGACCG AAATCGACGA CCGCTCCGAA AGCCTGAACA AAAAGGTACG CCAGGCCCAG 
ATCGACAAGA TTCCGTTGAT TATCACCCTC GGCGGCAAGG AAAAAGAGGC GCGCACCCTT 
TCCGTCCGGA CCCTGGACGG GCAGGTGCGC CACGGCGTTA GCCATGAAGC GTTTTTCGCC 
GTTGCAAAAG AACATATTGC AAAAAGATTG CAGACCCCGG TGGTCTTTGC ATAA 

 

Protein sequence

MITITLPDSS TKTFDGPVTG EQIAKSISEG LWRECVAVEV DGAAMDLSEP IATDAAVRLI 
TTRDPEGLHI MRHSAAHVMA EAVQRVFPDA ELTIGPVVED GFYYDIDMEP VSEEIFSRVE 
AEIKKIVSAK IPFVRKEVDK AEALDRYRDQ PYKTEILNEI EDDTVSLYTN GDFTDLCRGP 
HVPHTGFVRA VKLTKISGAY WRGDQNREQL QRLYGTAFFS KKELDAYLTL IEEAKKRDHR 
KLGAELDLFS FHEEAAGMPF FHPNGMKLWN ALLDYWRLEH RAAGYVEVKT PVMLDRALWE 
KSGHWENYRE NMYVSVIDDN QYAIKPMNCP GGMLLYKEKR YSYRDLPLRV AEIGLVHRHE 
LSGVLSGLFR VRAFHQDDAH IFMTPDQIEQ EIFGVLKLVE TIYSTFGLGF HLELSTRPAK 
SIGTDEQWVK ATAGLRAALD AYGKGYAVNE GDGAFYGPKI DVHIKDALGR TWQCGTIQLD 
MSLPERFDLS YIDAGSEKQR PVMIHRVIYG SIERFLGILI EHFAGKFPLW LAPTQAVLLP 
LNDDMIPYAR EVRQEFEQAG IRTEIDDRSE SLNKKVRQAQ IDKIPLIITL GGKEKEARTL 
SVRTLDGQVR HGVSHEAFFA VAKEHIAKRL QTPVVFA