| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3180 |
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| Symbol | |
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| ID | 5696042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3805424 |
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| End bp | 3807940 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641265799 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001531060 |
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| Protein GI | 158523190 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCACT TGTTCAACAT TCTTGTTTTT GCCGCAAGCT TTGCCGTCAT TGCCCTGGCG
TCAAAGCAGA TCGGCCACTA CCTGGTGCGC ACCTCCCTGC CCCTGATCAC CGGGTTTCTG
CTCACCGGCA TCCTGGCAGG CCCCCACGGC CTGAACCTGA TCTCCGCGTC CGCCGTTTCC
GGCCTGGGCT TTGTCGATGA AATCGCGCTG GCCTTCATTG CCTTTGCCGC GGGCAACGAG
CTTTACATCA AAGACCTGAA AAACCGGATT AAAAGCATTC AGTGGATGAC GGTGTGTCTG
GTTGTCGCCA CCCTTGGCAT CTGCGGCACC GCCATTTTTT TCCTGGCCAA CCAAATTCCG
CTGCTGGGAG CCCTGTCTGT GCCGGGCCGC GTGGCGGTGT CCCTGCTCGG GGCCTCTATT
CTCGTGGCCC TTTCCCCTTC AGCGACCATG GCCGTAATCA ACGAACTCCG GGCCAAGGGG
CCCTTCACCC AGACCGTGCT GGGCGTGACC ATGATCGCGG ACGTGGTGGT GATCACCCTG
TTTGCCATCA GCCTGTCGAT GACCAGCGGG CTGTTGACCG GCATGGGAAT CAATATCGGC
TTTATCGGCA TCCTGCTTCT TGAAATGTCT CTTTCCCTGG TTTTTGGGTA CCTGCTGGGC
AGGCTCTTCA TGGGCATTCT CCGGCTACCG GCAGGCAGGC CGGTCAAGGC CGGGGCCATC
CTGATGTCCG GTTACGGGAT ATATGCCCTT GCCGGGGCCA TCCGCGCCCT CTCTCAGTCT
TACCTGCCTT TCAGCATCAT TGTTGAACCC CTGCTGATCT GCATGATCGG CGGGTTTGTG
GTGTCCAACT ACGGCCAGGG CCGAATGGAG TTTTCAGACA TTCTCCAGGA ACTCGGGCCG
GCGGTGTACA TCGCCTTTTT CACACTTACC GGGGCATCCC TTCCCCTGGA TGTGCTGGCC
CGGACCTGGC AGATCGCCCT GGTGCTGGTG GTGGTACGGT TCGGCGCCGT GGTGGTCGGC
GCCGTGGCCG GCGGCGTGGC GGCACGGGAG CCGGCGGCCT ACAACCGGGT GGGATGGATG
GCCTACATCA CCCAGGCCGG GGTGAGCCTG GGCCTGGCCA AGGCGGTGGT GGTGGAATTT
CCGGAATGGG GCGGGCCTTT TGCCACCATT CTCATTGCCG TGGTGGTGTT CAACCAGATT
CTTGGGCCCC CGCTGTTAAA GCAGGCCATC CTTCTGCTGC AGGAGGCCCA TCCCAAGGGA
GAAGCCCCGG TCCACGCCGG CCCGCGGGAG GCCATCATCT TCGGCCTGGA ACCCCAGGCC
CTGGCCCTGG CCCGGCTGCT GGCATCCAAT GACTGGCAGG TGAGAATCAC CGTTCTGGGA
GGATGCGCGG ACACCTCCAG GAACATGGGT GTTAAAATCT GTCATATTCC CAGCCTGACC
CTGAACGCCC TTGAACAGAT GGATGCCGGC CGGGCCGAAG CCATTGTCAC CCTGCTTTCC
GATGAAGAAA ACCTTCGCGT CTGCGAACTG GCCTACGAAC ACTTCGGCAC GCCCAACCTG
GTGGTACGGC TCAATGACCG GGCCAACATC AACCGGTTCC AGGACCTGGG GGCACTGATC
GTGGACCCGG GAACGGCCAT GGTCAACCTG CTGGACCAGT TTGTGCGCTC GCCCTCGGCC
GCCTCCCTGC TGCTGGGCAT GGAGGAAAAC CAGAGCGTGG TGGAGCTGGA GGTGAGAAAC
CCGAACCTGC ACGGTATTGC CCTGCGGGAC CTGCGCCTGC CCATCAGCAC CCTGATTCTA
TCCATTCGCC GCCATGGCCA GGTGCTGGTG TCCCATGGGC ATACCCGGCT GGAGGTGGGG
GATACCGTCA CCCTGGTGGG CACGCCGGAA AGCCTGAAGG AGGTGGAGCT GAAGTTTGAC
GTGAACCGGG AACACGCCCT GGCCCATCTG GTAGAAAGAA TAACACCCCG GGCGCTGGTT
TCCGATTCCC TGGCCACCGA GGTAAGAGAG ATGGTGCGGA CCGGCCCGGA AGCCCCGGAT
GCAAACCGGC CCATGGACCG GTTTGACCGG TTTATCGAGG AGGGCCTGGT GCTGGACCTG
GACCGCCGGG TAGGCGTGGA AGAACTGTTC AGACAAATCG CCGATGCCCT GGCACCACGG
CTGGCCACAC CGCCGGACCG TCTTTACGCG TTGCTGGTGG CCCGGGAAAA GGAGAGCAGC
ACCGCCATCA CCCAGGGCCT TGCCATCCCC CACATCGTCA TTGACGGATC CCGCACCTTT
GCCATCCTGC TGGCCCGGTG CCGCCAGGGG GTGCGTTTTT CCGACGCCGC GCCCATGGTG
CATGCCGTGT TTGTGCTGGC CGGCACCAGG GACGAACGAA ACTTTCACCT GCAGGCCCTC
TCCGCCATTG CCCAGATCGT TCAGAACCCC AACTTTGAAC GGCTGTGGCT GCGGGCCAAA
AACGCCCAGG CCCTGCGAGA AGTGGTGCTG CGGGCCGAGC GGAAACGGCA GGGATAA
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| Protein sequence | MEHLFNILVF AASFAVIALA SKQIGHYLVR TSLPLITGFL LTGILAGPHG LNLISASAVS
GLGFVDEIAL AFIAFAAGNE LYIKDLKNRI KSIQWMTVCL VVATLGICGT AIFFLANQIP
LLGALSVPGR VAVSLLGASI LVALSPSATM AVINELRAKG PFTQTVLGVT MIADVVVITL
FAISLSMTSG LLTGMGINIG FIGILLLEMS LSLVFGYLLG RLFMGILRLP AGRPVKAGAI
LMSGYGIYAL AGAIRALSQS YLPFSIIVEP LLICMIGGFV VSNYGQGRME FSDILQELGP
AVYIAFFTLT GASLPLDVLA RTWQIALVLV VVRFGAVVVG AVAGGVAARE PAAYNRVGWM
AYITQAGVSL GLAKAVVVEF PEWGGPFATI LIAVVVFNQI LGPPLLKQAI LLLQEAHPKG
EAPVHAGPRE AIIFGLEPQA LALARLLASN DWQVRITVLG GCADTSRNMG VKICHIPSLT
LNALEQMDAG RAEAIVTLLS DEENLRVCEL AYEHFGTPNL VVRLNDRANI NRFQDLGALI
VDPGTAMVNL LDQFVRSPSA ASLLLGMEEN QSVVELEVRN PNLHGIALRD LRLPISTLIL
SIRRHGQVLV SHGHTRLEVG DTVTLVGTPE SLKEVELKFD VNREHALAHL VERITPRALV
SDSLATEVRE MVRTGPEAPD ANRPMDRFDR FIEEGLVLDL DRRVGVEELF RQIADALAPR
LATPPDRLYA LLVAREKESS TAITQGLAIP HIVIDGSRTF AILLARCRQG VRFSDAAPMV
HAVFVLAGTR DERNFHLQAL SAIAQIVQNP NFERLWLRAK NAQALREVVL RAERKRQG
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