| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3168 |
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| Symbol | |
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| ID | 5696030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3794856 |
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| End bp | 3796250 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641265787 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001531048 |
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| Protein GI | 158523178 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000659568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTG TTTTTTTTAA AAGTGTTCGG CTTTGGATAT GGTCCTGTTT TGCCGCCATG
TTCTTTTTTG CAGTTACACC GGCGCAGGTG TCCGCTACGG ATGCGGCCCA ACAGGAGGTC
CGGGATACGG TGGTGGCGAG CATGGAAGCC GTGTGGACCG GGAAGGCTTT TGCGCCTGAC
CTGGCCCAAA AACAGCAAAA AATGAGAAGC ATGCTTGATA AGGGCCTTTT AACCAAAGCC
GAACTTGAAT CGATTGTAGA GCAGACGATT CCCATCCTGA TGAACCGGCA CATCACATCC
AGGTACTATT TGCAGGAAAT CTCCGGAAGG ATTGACGGGC TTTTTGGTTC TCATTTAACA
TGGGAAGAGA TTAAAAAACG GGTCTGGAAA GAGATGGCGT CCATTGTCAA GGACGGCGAC
CAGATGGTTT TCAAGGTCGG CACCCTTGCC CCCAAAGGCA CGCCCTGGCT GAACGTGCCG
GAAAAGATGC TGATTCCCCG CATGGAAGAA TTAAGCGACG GAAAGATCAC GCTGAAGCTT
TACGGCGGGG GCATCATGGG AGAAGATTAT GATATTTTAA GAAAAATCGA CATCGGCCAG
CTCGACGTCT GCGGGGCCAC AACCCTGGGC ATGCTGGCCG CCTCCCCGGA AACCGCGGTG
TTCATGCTGC CGGGGCTGTT CAACAACTAT GAAGAGATCG ACTACATATA CAAAAAGTTT
CGGAAACGCA TAGACGCGGG CTTTGAAGAA AGAGGGTATA TCCTGGCGGC CCTTATCGAC
ACCGGACACT TTCACATCTA CTCAAAAAAC CGGATAGACA GCCTTGCGGA CCTTAGAAAA
CAGAAGGTTA TCAGCTGCTG GGGGACGGTT GAAAGCACCA TATACAATGA ACTCGGTATC
AACCCCATAC CCGTGGTAGT GCCGGAAGTC ATGTCGGCCT TGAGCACGGG GCTGGCCGAC
ACCACCCTGG CCCCCGCCGC CTGGATGCTC GGCATGCAGG CATATCAATA CGCCGGTTAC
TATATCACCC CACCGCTGCT CTTTTCACCG GCTGTTGTTA TCCTCGGCGT CCGGGCCGTG
GAAAGAATAC AGCGGCACTT TGAAGCGTCG GACACCTTTA CCCGCAATGT TCAGGAGCTG
CTCGTGTTTG AGGTTGGCCT GTTTGAAGGG GCTTGGAGAG ACCAGATCAG GACCTACGAC
GAGCGGGCAC TGAATGCCTT TAAAACCAAA ACCGGCATGA AAGCCGTGAC CCTCTCCGCC
GCAGACCAGG CAGCCATCGC CCAGGCGGGC CTGCGGGTCA GAAAAAAACT AGCCGGCACC
ATCTTTTCCG AGGATCTCAT GAATGACGTG CTTGGCGCCC TTGAGGAATT CCGGGCGAAC
CAGGCGAAAC CCTGA
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| Protein sequence | MSSVFFKSVR LWIWSCFAAM FFFAVTPAQV SATDAAQQEV RDTVVASMEA VWTGKAFAPD
LAQKQQKMRS MLDKGLLTKA ELESIVEQTI PILMNRHITS RYYLQEISGR IDGLFGSHLT
WEEIKKRVWK EMASIVKDGD QMVFKVGTLA PKGTPWLNVP EKMLIPRMEE LSDGKITLKL
YGGGIMGEDY DILRKIDIGQ LDVCGATTLG MLAASPETAV FMLPGLFNNY EEIDYIYKKF
RKRIDAGFEE RGYILAALID TGHFHIYSKN RIDSLADLRK QKVISCWGTV ESTIYNELGI
NPIPVVVPEV MSALSTGLAD TTLAPAAWML GMQAYQYAGY YITPPLLFSP AVVILGVRAV
ERIQRHFEAS DTFTRNVQEL LVFEVGLFEG AWRDQIRTYD ERALNAFKTK TGMKAVTLSA
ADQAAIAQAG LRVRKKLAGT IFSEDLMNDV LGALEEFRAN QAKP
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