| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3165 |
|---|
| Symbol | |
|---|
| ID | 5696027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 3793279 |
|---|
| End bp | 3793992 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641265784 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001531045 |
|---|
| Protein GI | 158523175 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000928141 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCACTT TTGTTCTGGT TCATGGTTCA TGGCACGGGG CCTGGTGCTG GTACAGATTG
ATACCCCTTC TGGAAGCGGC CGGCCATCGG GTAATTGCGC CGGACCTGTC GGGTTTTGGT
CGCGACAAAA CCCCCATCGC CGAGATAGGT CCGGACACGT GGGCACGGGA TATCGGCCGG
ATTCTTGACG CCGCGCCGGA GCCGGTCCTT CTGGTCGGTC ACAGCCGGGG GGGCATGGTA
ATCAGCCAGG CGGCCGAGGC AAGGCCCGAC AAGGTGCGGG CACTGATCTA TCTCTGCGCG
TTTCTGCTGC GCGACGGCCA GTCGGTACTG GATGTTCTGC TGGCCGATTT GACGTCAGAC
GTCACCTGCA ACGTGGAGAT CAACGAGGCC GGCGGATATG CCACCCTTCC GGAAACCGCT
GTTCAGCAGG CCTTTTACGG TGATTGCGGC GACGCGGACG TGGCCCTGGC CCGGCTTCTG
CTTCAGCCCG AACCCATGGC CCCGGTCATC GTGCCGATTC ATGTCACTTC GAAAAACTTC
GGCCAGGCCC CTCGGGTATA CATTGAGTGC CTGCGGGACA GGGCCATAAC GCCGGAAGCA
CAGAAACGGA TGTACAGCGC CACCCCATGT GATACCATCA TCACCATGGA CACGAGCCAC
TCTCCGTTTT TTTCAGCGCC TGAAGCACTG GCGCGTCACC TGATATCGAT CTGA
|
|---|
| Protein sequence | MSTFVLVHGS WHGAWCWYRL IPLLEAAGHR VIAPDLSGFG RDKTPIAEIG PDTWARDIGR
ILDAAPEPVL LVGHSRGGMV ISQAAEARPD KVRALIYLCA FLLRDGQSVL DVLLADLTSD
VTCNVEINEA GGYATLPETA VQQAFYGDCG DADVALARLL LQPEPMAPVI VPIHVTSKNF
GQAPRVYIEC LRDRAITPEA QKRMYSATPC DTIITMDTSH SPFFSAPEAL ARHLISI
|
|---|
| |