| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3163 |
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| Symbol | |
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| ID | 5696025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3790349 |
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| End bp | 3791665 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641265782 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001531043 |
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| Protein GI | 158523173 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.114353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAAG CCAAACGAAA AACCGGACTG GTCTTTTTCC CGGCCTTTGA CTGGGCCATT
GATCCCACCC ACCCGGAACG GGAGGAGCGG CTGCTCTACA CCCAGGACCA GGCACTGGAA
GAAGGGCTCT TTGACATTGA CGGCCTGGTG GAGTTCAAGT CCGACGTGGT CACCGAGGCG
GACGTGAGCC GGGTTCACTT CTGTGTACCC ACCGTGGCCG CGGTAATGAC CGAGTCCCAC
TTTATCAGCG CGGGCAGCGC CAAGCGCATC GGCGTCGCCG TCATGAACAA GGAGATCGTA
AACGGGTTCG CACTGGTGCG GCCTCCCGGC CACCACGCCA AACGGGTGGT GCACGGGGCC
AGAGGCTTCT GCAACGTCAA CATCGAAGCC ATCATGATCG AATACCTGCG AACCTTCCAC
AAGGTAAAAA AGGTGGCCAT CGTTGACACC GACTGCCACC ACGGCGACGG CACCCAGGAC
ATCTACTGGC ACGATCCGGA CACCCTGTTT ATCTCCATTC ACCAGGACGG CCGCACACTG
TATCCGGGGT CGGGGTTTCC CGAAGAGATG GGCGGGCCCA ATGCCGCGGG CCGCACGTTG
AACATTCCCC TGCCCCCCCG GACCTCGGAA GACGGGTTTC TCCATATTAT CGAAAACGTG
GTGCTGCCCG TACTCAAGGA TTTTAAGCCC GACATCATCG TCAACTCCGC CGGTCAGGAC
AACCACTACT CCGACCCGCT TACCGACATG AACTTTTCGG CCCAGGGGTA TGCCCGGCTC
ACCGAGCTGC TGAAGCCGGA CATTGCCGTG CTCGAGGGCG GCTATTCCAT TGAAGGGGCC
CTGCCCTATG TCAACGTGGG CATCATCCTG GCCATGGCCG GTGTGGATTA CAGCAAGGTC
AAAGAGCCGG GATACGATCC CGAGGCCATT CGCCAGTCCG CCAACGTGAC CGCCCAGATT
GAGCGCATCG GCAACGCCGT GCTGGAGCTG TGGCAACAGC GGGACAGCCT CACCGAACAG
CGCCAGGCCG GCAAGGAGTT TGAGGAGCGG ACCAGCCGCA TCTTCTACGA CACCGACGGC
ATCTACGAAA CCCAGCACGA AACCATCCGT ATCTGCAGGG AGTGCGGCGG CGCCCTGCGC
ATCGACTCCT CCTCGGACCG GGGCAACCGC ATTCTGGCGG TTCACATTCC GCTTTTCGCC
TGCGACGCCT GTAAAGCCAC CGGCCACCAG TGGTACGACG AGGCCGATGT CTCCCAGTAC
CGCAAGGTCT TTCTGCAGAA TCGGCCCGAT GACGCGTACC TTGAGAAGAA GGCCTAG
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| Protein sequence | MLKAKRKTGL VFFPAFDWAI DPTHPEREER LLYTQDQALE EGLFDIDGLV EFKSDVVTEA
DVSRVHFCVP TVAAVMTESH FISAGSAKRI GVAVMNKEIV NGFALVRPPG HHAKRVVHGA
RGFCNVNIEA IMIEYLRTFH KVKKVAIVDT DCHHGDGTQD IYWHDPDTLF ISIHQDGRTL
YPGSGFPEEM GGPNAAGRTL NIPLPPRTSE DGFLHIIENV VLPVLKDFKP DIIVNSAGQD
NHYSDPLTDM NFSAQGYARL TELLKPDIAV LEGGYSIEGA LPYVNVGIIL AMAGVDYSKV
KEPGYDPEAI RQSANVTAQI ERIGNAVLEL WQQRDSLTEQ RQAGKEFEER TSRIFYDTDG
IYETQHETIR ICRECGGALR IDSSSDRGNR ILAVHIPLFA CDACKATGHQ WYDEADVSQY
RKVFLQNRPD DAYLEKKA
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