| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3157 |
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| Symbol | |
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| ID | 5696019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3783820 |
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| End bp | 3784869 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641265776 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001531037 |
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| Protein GI | 158523167 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00466763 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA AGCAGGGCAT AATCAAAAAG GCGGTCTGGG TGCTGGCGGC TGTTGTCATG
GCCGTCTGGG CGGCAGGACC TGTGACCATT GTCCGTGCCG ACACAGCGCC GAAGGTTGTC
TGGAAGGTGG GGACACTCAC GCCCAAGGGC GTGGGCTGGG CCCACCAGTT TGAAACCATC
ATGATGCCGG TTATTCAATC CGGCACCAGC GGCGAGCTGA AGGTGAAGGT GTACTGGGGC
GGCCTGATGG GAGACGATGA GGATATCGTG GCCAAGATGC GGGTGGGCCA GCTTCAGGCC
GCCGGCCTCA CCGGTCAGGG CGCCACCATT GCCTGCCCCG AGTTTGCCGT GGTGGAGCTG
CCCTTTCTTT TTAAGAGCTA TGCCGAGGTG GACCACATTC GGGAAAAGAT GTGGCCTGAA
TTCGACCGCC TGATGCAGGC CCGGGGCTTC AAGCTGCTGG CGTGGCTGGA TCAGGATTTT
GACCAGATAT ACTCGGTGAA GTGGAGTTTT ACGGATCTTG CCGATTTTCA GAAGGCCCGG
TTCATGACCT GGTACGGCAC TCTGGAAGAG CACCTGCTCA AGAGCCTCAA TGCCAGCCCC
ATTCCCGTGA ACATTCCCGA GCTGGCGCCC TCCCTGCGCC AGGGCGTGGC CGACTCCCTG
ATCGCGCCGG CCCTCTGGAT GATCGCCACT CAGCTCTACC CGGTGGTCAA CTACATGGTG
CCGTTAAAGA TCCGTTACTC CCCGGCAGTG GTTGTCTGTA CCCTGGATGC ATGGAACGGC
CTGTCGGCGT CGTCCCGGGC CGGCCTTGCC GCGGCCCGGC CGGAGATGGA AAAACAGTTT
GTGGCCGCCT CCCGTAAGGA CAATCAAAAG GCTATGGACG CCATGGTCAA ATACGGCATT
GTGCGGGTGG ACATGACCGA CGCCCAGGTG GAGACCATTC GAAAAGGGGC CGTGACCGTG
TGGGACGATC AGGCCGATAA ACTTTATTCC AGGGAACTGC TTGACCGGAT ACTGGTCCAT
CTGGACCAGT ACAGGAGCCA AACCCCGTGA
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| Protein sequence | MMKKQGIIKK AVWVLAAVVM AVWAAGPVTI VRADTAPKVV WKVGTLTPKG VGWAHQFETI
MMPVIQSGTS GELKVKVYWG GLMGDDEDIV AKMRVGQLQA AGLTGQGATI ACPEFAVVEL
PFLFKSYAEV DHIREKMWPE FDRLMQARGF KLLAWLDQDF DQIYSVKWSF TDLADFQKAR
FMTWYGTLEE HLLKSLNASP IPVNIPELAP SLRQGVADSL IAPALWMIAT QLYPVVNYMV
PLKIRYSPAV VVCTLDAWNG LSASSRAGLA AARPEMEKQF VAASRKDNQK AMDAMVKYGI
VRVDMTDAQV ETIRKGAVTV WDDQADKLYS RELLDRILVH LDQYRSQTP
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