Gene Dole_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_3139 
Symbol 
ID5695999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3767607 
End bp3768524 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content46% 
IMG OID641265756 
Producthypothetical protein 
Protein accessionYP_001531019 
Protein GI158523149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCAAAA AACAGGTGAA AAATATCTCA GCATCCATAC GGCAAAAGCT GCTCAACAAA 
TCCAGAACTG ATGCCCGTCC TTTTCAAGAA CTGGTTCAGT ATTATGCCAT GGAGCGGTTT
CTGTATCGCC TGGCACAGTC CCGGCACGCC AACCGGTTTA TTCTGAAAGG GGCGCTGATG
CTTCGGATCT GGCAAGCCCC GGAAACTCGT TCAACGATGG ACATTGATCT GCTTGGCAAA
ACAGATAACA ATGTGTCAGC GCTCATTTCC AATATAACCG AGATACTCTC TGTTGATGTT
GATCCCGACG GCCTCTCTTT CTTTCCTGAA AACATAATGG GCGAGCATAT TACTGAGGAC
GCGGAATATA AGGGAGTAAG GATCTGCTTT CCGGCAAAGC TGGATACGAT GAAGCTAAAT
ATGCAGATTG ATATAGGCTT CGGCGATATT ATCCATCCCG CGCCTGAAAG ATCAGAAATA
CCCACCATAC TGGAGTGCCC GGCACCTCAA TTATTGTGTT ACAGCCGTGA AAGCTCGATC
GCTGAAAAAT TTGAAGCCAT GTTGAAACGT AGAGAGTTGA ACAGCCGGAT GAAGGACTTC
TGTGACATCT GGCTCCTTTC CCGCTATTTT GATTTTGATG GGAAAATTGT GTCAGAAGCC
ATTAGGTTGA CGCTTGAACA ACGCGGGACA GAACTTCCAG GCAACATAAA TATAGTCGCC
TTTTCGCACG AGTTCATCAT AGCGAAACAA GTCCAATGGA ACGCTTTTAT GAAAAAACTC
AGACAGGATC ATGTTCCTGC TGAGTTCGAA ACCATCGTCA TGCAAGTGAA AGGATTTATC
AGCCCGATAA TCTCGGCTTT GATTGCACGA AAGACACCAC CTTCAAAATG GACTGCACCT
GGTCCATGGG CCTTCTGA
 
Protein sequence
MTKKQVKNIS ASIRQKLLNK SRTDARPFQE LVQYYAMERF LYRLAQSRHA NRFILKGALM 
LRIWQAPETR STMDIDLLGK TDNNVSALIS NITEILSVDV DPDGLSFFPE NIMGEHITED
AEYKGVRICF PAKLDTMKLN MQIDIGFGDI IHPAPERSEI PTILECPAPQ LLCYSRESSI
AEKFEAMLKR RELNSRMKDF CDIWLLSRYF DFDGKIVSEA IRLTLEQRGT ELPGNINIVA
FSHEFIIAKQ VQWNAFMKKL RQDHVPAEFE TIVMQVKGFI SPIISALIAR KTPPSKWTAP
GPWAF