| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3127 |
|---|
| Symbol | |
|---|
| ID | 5695987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 3752334 |
|---|
| End bp | 3753815 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641265744 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001531007 |
|---|
| Protein GI | 158523137 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4927] Predicted choloylglycine hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCC TGTCACTCTT CGGCCTGACA ATTCTCTGTT TGATTCTGCC GGCACAGATG
TTGTTCGCCT TTGCGCCCAA GCCACCTCCA CCTCCCCCGC CTCCCCAGAC TACCCCGGAA
CCCGCACCCG GCCTCAGAGT CGATCGCGTG TACGCGCCCG GTGGAAAAGG TTATCTGGAA
TATATCATCA CGGATACAGG ACAGAAACAG CCCTTCCTGC ATCTGGAAGG CAGCGGATAT
GAAATGGGCT ACCAGCAGGG ATATCTGATT CCGGAAAAGT GCAGAGCGGT TGCCTCTGAT
GATTTCTATA TTGATCTCGG CACCAGCATG ATAGGGGGCA ATACAGGCAT CGACACGGAC
ATATTTCTGG AACCGATAGC GGAAATGCTC TTGGAGTTCC TGGGCATGGA ACGCTCGGAT
TATCCCGATA CGTCGCTGGC AGATATACTG CTTTTCACTT TCAAGAAAAT CGCGCTGTAC
AATGAAAAAT ATATTCCCCA GGAATATCTT GATGAAATGC ACGGCATTTC TGAGGGTGCC
AGGGCACGGG GGATAGATCT TCCTTACGAA GATGTCCTGC TTCTCAATAT GGGCTTTGAC
GCCTTCTTGA GCGCCGGCTA TCCGATTATG GTTTCCCTTG TTGAAATCGA AAAACTTCTT
GATAACCTTG AACTTTCGTG TAACGCGCAT ATACTGGACG GCAACGCCAC CGTGAATGAT
GTTCTCTATT TTGGCCGGGA CTTCATGTTC GGCGGCGCGG GGTTTTCCGA TCACCCGGTT
ATTATTGAAA CCTTCGGCAA GGGCAGAAAC CGGATGGTCA ATGTCACGGT GGCCGGAATG
GTAGGATGCA TCGCCGGAAT GAACGAAAAA GGCCTTGGCA TCGGCATGGA CATGGTACCG
GCCTTTGATT GCAGCCCCGG TGATGTGGGC ATGGGCACCC TGTTGACCGC CCGCTGGGTC
ATGGAACAGG CCGATGAGTT GCCAGAGGCC GTTTCGATGA TCAAAAAATC CAAGCGGGGT
GTTTCCTGGA TATATGCCAT TGCCGACGGA AAAGGGGCCA ACCGGGGGGG TGTGTCCCTG
GAGGTATCAG CGCACAATTA CGGTACCCGG TACCTGAACC ACCGGCAGGA GTTCCTGGTA
CCCCTTCTGT ATGGTGTTGA CCAGCAGGAA ACCTACAGCG ACGCCCTGAT TCAGACCAAC
CATTTTCTTA CCCTTAATAT GAACTCGCTG GCTGGCACCT ATGTGGATGG CGACTCAGAT
AGACGCTATG ACGACATGGT CCCTCTGCTC AAGAAGGATT ACGGGAAGTA TGACTACAAC
AAGGCCTTTG ACTTCATCAA CTGGATGTAT CTTGCGCGTA ATCAGGGGCC CGGTGACTAT
GTCCACCAGA GCACCACACT GTTCGACCTG ACGAATCTGA AAATGACGAC CCTTGCAGGG
CCGAAATTCG GTCAGGGAGC AACAACCCTG AGGCTGCAGT AA
|
|---|
| Protein sequence | MKRLSLFGLT ILCLILPAQM LFAFAPKPPP PPPPPQTTPE PAPGLRVDRV YAPGGKGYLE
YIITDTGQKQ PFLHLEGSGY EMGYQQGYLI PEKCRAVASD DFYIDLGTSM IGGNTGIDTD
IFLEPIAEML LEFLGMERSD YPDTSLADIL LFTFKKIALY NEKYIPQEYL DEMHGISEGA
RARGIDLPYE DVLLLNMGFD AFLSAGYPIM VSLVEIEKLL DNLELSCNAH ILDGNATVND
VLYFGRDFMF GGAGFSDHPV IIETFGKGRN RMVNVTVAGM VGCIAGMNEK GLGIGMDMVP
AFDCSPGDVG MGTLLTARWV MEQADELPEA VSMIKKSKRG VSWIYAIADG KGANRGGVSL
EVSAHNYGTR YLNHRQEFLV PLLYGVDQQE TYSDALIQTN HFLTLNMNSL AGTYVDGDSD
RRYDDMVPLL KKDYGKYDYN KAFDFINWMY LARNQGPGDY VHQSTTLFDL TNLKMTTLAG
PKFGQGATTL RLQ
|
|---|
| |