| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3124 |
|---|
| Symbol | |
|---|
| ID | 5695984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 3747086 |
|---|
| End bp | 3747802 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641265741 |
|---|
| Product | enoyl-CoA hydratase/isomerase |
|---|
| Protein accession | YP_001531004 |
|---|
| Protein GI | 158523134 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000198349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTG CTGATTTAAC CCTGGATGGT ACCGTTGCAG TGATCACAAT GGACAATGGT
GAAAACCGCC AGAACCTGGC CTTTGCTCAG GCCATGGGAA AGGCCATTGA CGGGGCACTG
GCAAACGAAT CCGTAACCGC CATGATCATT ACCTCCACCG GGGAGAAAAT TTTTTCAGCC
GGGGTTGACC TGGAATGGAT GATGGACCGG TTTGCAAACA ACGCCTTGGA CGATATGCGG
GCCTTTATGT ACGGCATGAA CGATGTGTTT AAAAAATGCC TCCTGGCGCC TGTCCCCGTG
ATCGCGGCCA TCAACGGCCA TGCCTTCGGC AACGGGGCTA TCCTGTCCTG CGCCTGTGAT
TTCCGGTTCA TGAAGTCGGA CCGGGGCTTT TTCTGCTTTC CGGAGGTGGA TGTCCGCATT
CCATTTTTAC CCGGAATGGT GGCCTTTGTG AAAAAGGCCA TTCCCTACTA CAAGTTCAAT
GAGATGAAGC TGACCGGCAA AAGGGTCGCC GCGCCGGAGC TGGAGGAACA CCATATCATT
GAAAAAGCCT GTGTCGATAA AGACGACCTC ATGGCCCAGG CCCTGGCCTT TGCCCGGACA
TTTAACAAAC AGAGGGGCAT ATTCGGCGAG CACAAGCGCC GGCTGCACAA ACATATTGTT
GACATTATCG ACAATGAAGA CCCGGAATAT ATTGAACCTC TGAATCTTAT GATGTAA
|
|---|
| Protein sequence | MSIADLTLDG TVAVITMDNG ENRQNLAFAQ AMGKAIDGAL ANESVTAMII TSTGEKIFSA
GVDLEWMMDR FANNALDDMR AFMYGMNDVF KKCLLAPVPV IAAINGHAFG NGAILSCACD
FRFMKSDRGF FCFPEVDVRI PFLPGMVAFV KKAIPYYKFN EMKLTGKRVA APELEEHHII
EKACVDKDDL MAQALAFART FNKQRGIFGE HKRRLHKHIV DIIDNEDPEY IEPLNLMM
|
|---|
| |