| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3117 |
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| Symbol | |
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| ID | 5695977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3737583 |
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| End bp | 3739229 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641265734 |
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| Product | WD40 domain-containing protein |
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| Protein accession | YP_001530997 |
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| Protein GI | 158523127 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000028868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATCAA AAAAATCAAT TCGACTGGTA CTGACTGCAC TCCTTTTTGC GCTGCTGCTG
TTCCCTGCGC AGAACGCCAT GGCCGGGACG GTGGCCGAGG GCAGCGCCAC CCTGGAAAGC
CTTCACACCG ACAGCACCCA GGGAGACGGT GACAGCTACA GGCCGTCGAT TTCCGCGGAT
GGCCGGTATA TCGCCTTTGA GTCCGAGGCA TCCACCCTGG TGGATGGGGA TATCAACGAT
TCTAAGGATA TTTTTCTGCG GGACACCACT GAGGGTACCA CCACGCTGGT GAGCGTGGCT
GCCTCCTATG GCGCCCCCTA CGGCTATGGC GCGGATCTTG GTTCCTCCAG CTCCGCCATC
AGCGGCGACG GCCAGTATGT GGCCTTTGAT TCTAACGCCA CCAACCTGGT TGCCGGCGGC
ACTTACGGCC AGCAGGTGTT TGTCCGCGAC ACAGTTGGCG GCACAACAGC CCTGGTCAGT
CCCAACTATG GCGGCACTTA CGGAGCTCAC GGCTATGGCG CCAACGGCAA CAGTGCTTAT
CCGTCCATCA GCTTTGGAGG GCGGTATGTG GCCTTCCAAT CCTATGCCAC CAACCTGACC
GACGACGGCG CCACGAGTTA TAGCGCCATC TTTATCCGCG ACACTCAGGA AGGCGCCACC
ACCCGGATCA TGGCCTATGG CGGGGCACAA CCCGACAACA ATTCCTACTA CCCGGCCATC
TCCGGAGACG GTTCGGCCGT GGGCTTTCAG TCCAGGGCCA GCAACCTGCT TGAAGCAAAC
AACCCTGATA CGGGGGACCA AAACATCTAT GTTTACGACA CCGCTTCCGG CGCCATTGAG
CTGATCAGCC GGGCCTATGG AAGCGCCTTG TCTGAAGAGA TCACTCCCAC TTATGGGGCG
AATGGCGGCT GCGACAACCC GGTCATCAGC TACGGCGGCC GTTACGTGGC ATTTTACTCC
TATGCCACCA ACCTGGTCTA TGGCGGCAGT AACGGAGAGT ATCAGGTTTA TGTATATGAC
CGGACCTCCG GTGAAATGGT GGTGGCCAGT GCCGAGGATG GAGGAACAAG TGAAGGAAAT
AACACATCAG ATAGGCCCTC CATCTCGCCC GACGGCCGGT ATGTGGCCTT TAGATCCCAA
GCCACCAACC TTGTTACGGA TGTAACTGAA TATACCAGCT CCGACTATCT TGTCTTTCTG
CGCGACACTG TGGATCAAAA AACGACACTC ATCTCCAGGA TAGACAATAC CGTGGGCGGA
TACGAGGCCG GCGTATACGG CGGCGGCATC AACAATGCCC CTTCGGTCAG CGACTGCGGC
ATGTATGTGG CTTTTGGCGC AGCCGGCAGC TACTTTGTGG AGGGTGACAC AAACGGGAAC
AGCGACATTT TCCGGGTACT CAACGATACC GACGGCGACG GCATTGGTGA TATGGATACC
GACGGCGACG GCACGCCCGA CTGCGTGGAC CTCTGCCCGG ATGATCCGGA CAAGATCGAG
CCCGGGGCCT GCGGGTGCGG TGTTGCCGAC ACCGACGCCG ACGGCAACGG CATTGCCGAC
TGCCTGGAAG ACGACGAGGA ACCGGCGCCA CGTCTGCCTG ACACCGACAT CGGCCCGGAT
TGTTTCATCT CGACCCTTGT TTTTTAA
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| Protein sequence | MGSKKSIRLV LTALLFALLL FPAQNAMAGT VAEGSATLES LHTDSTQGDG DSYRPSISAD
GRYIAFESEA STLVDGDIND SKDIFLRDTT EGTTTLVSVA ASYGAPYGYG ADLGSSSSAI
SGDGQYVAFD SNATNLVAGG TYGQQVFVRD TVGGTTALVS PNYGGTYGAH GYGANGNSAY
PSISFGGRYV AFQSYATNLT DDGATSYSAI FIRDTQEGAT TRIMAYGGAQ PDNNSYYPAI
SGDGSAVGFQ SRASNLLEAN NPDTGDQNIY VYDTASGAIE LISRAYGSAL SEEITPTYGA
NGGCDNPVIS YGGRYVAFYS YATNLVYGGS NGEYQVYVYD RTSGEMVVAS AEDGGTSEGN
NTSDRPSISP DGRYVAFRSQ ATNLVTDVTE YTSSDYLVFL RDTVDQKTTL ISRIDNTVGG
YEAGVYGGGI NNAPSVSDCG MYVAFGAAGS YFVEGDTNGN SDIFRVLNDT DGDGIGDMDT
DGDGTPDCVD LCPDDPDKIE PGACGCGVAD TDADGNGIAD CLEDDEEPAP RLPDTDIGPD
CFISTLVF
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