| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3109 |
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| Symbol | |
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| ID | 5695969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3727205 |
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| End bp | 3728065 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641265726 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001530989 |
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| Protein GI | 158523119 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTCTG TTGACACAGC AACCCGGCTG TGCGCGGTCA TCGGCAACCC GGTGGAACAC
AGCCTGTCCC CGGCCATTCA CAACGCCGCC TTTGCCGCCC GGAACCTTAA TTTTGTCTAT
GTCGCCTTTC GGGTGAATGA TGTGGGCCCG GCCCTGGCCG GCATGCGGGC CCTTGAAAAC
TTCCGGGGCA TGAGCATCAC CATTCCCCAC AAGATCTCGG CCATCGGCCA TGTGGATGAG
ATCACGGACC TGGACCGGGC CATGGGCGCC ATCAACACCG TGGTCAATGA AAAGGGCCGG
CTGACCGGCT CCAACACCGA CGGCCCCGGC GCGTTAAAAG CCCTTAAAAA TGCCGGGGTG
GAAACATCCG GCAAAACCGT TCTGATGCTG GGGGCCGGCG GCGTGGCCCG GGCCATTGCC
TTTACCCTGG CATGGCAGGC CGACATTGCC GAACTCGTGC TGCTGGACAT CGACAGTGCC
CTGCGGGAAC AGCTCTCGTC GGACCTGAAA AACGGAACGT CCGCCACCAT CACTGCCGCA
GGCTTTGAGA ATAAAGCCCT GGCCCATGCC ATGGCCCGGG CCGATATCGT GATTCACTGC
ACCCCCGTTG GCATGCATCC CAAAACCGAT GCCTCCCTGG TGCCGCCCGA CCTGTTCCGG
CCCGGCATGG CGGTGTTTGA CGTGGTTTAC AACCCCCTGG AAACAAAACT GCTGACCGAG
GCCGCTGCCT TTGGCCTGAA AACCGTCTCC GGGGTGGAGC TGTTTGTGAA CCAGGCCGTG
CTTCAGTTTG AAAAATTCAC CGGCGAAACC GGGCCGGCGG ATGTGATGCG CCGGGTGGTC
ATGGAGCATC TGAAGTCATG A
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| Protein sequence | MHSVDTATRL CAVIGNPVEH SLSPAIHNAA FAARNLNFVY VAFRVNDVGP ALAGMRALEN
FRGMSITIPH KISAIGHVDE ITDLDRAMGA INTVVNEKGR LTGSNTDGPG ALKALKNAGV
ETSGKTVLML GAGGVARAIA FTLAWQADIA ELVLLDIDSA LREQLSSDLK NGTSATITAA
GFENKALAHA MARADIVIHC TPVGMHPKTD ASLVPPDLFR PGMAVFDVVY NPLETKLLTE
AAAFGLKTVS GVELFVNQAV LQFEKFTGET GPADVMRRVV MEHLKS
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