Gene Dole_3103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_3103 
Symbol 
ID5695963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3720308 
End bp3721402 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content57% 
IMG OID641265720 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001530983 
Protein GI158523113 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000188505 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATT TTTCGATGTC AAAACAGCAG CAGATGGTCA AAAAGGAGGT CGCGAAGTTA 
GTTAAAAACA TTGTGGCCGA CACCGCCCAC GACATGGATG AAAGCGGCCA GATTCCGGCC
GACGCCATTG ACAAGGCATG GGGACTGGGG GCTTCCATCT CCATGGTGCC CGAGGAGTAC
GGCGGATACG GCATGGCCGA CTCTCCCCTG GAGACCGCCC TGGTGCTGGA GGAGCTGGCT
TTTGGCGATA TGGCTTTTGC CGTGGCGGTC ACTGCTCCTT CCCTGTTTAT CACGCCGGTG
GCCAAGATGG GCACCGAGGA CCAGAAGAAA AAATACCTGC CCCTGTTCTG CAAAGAGGAA
TATGCCGCCT GCACCATGGC GTTAAACGAA CCCCGGTTTG GTTTTGACGC CGTGGATCTG
AAGACAACGG CCGAGAAGAA GGGCGGTGCC TATGTGTTAA ACGGCGAAAA ATGTTTTGTG
CCCATGGGGG CCAACGCCTC TCACATGCTG GTGGCGGCCA ACCTGGACGG CAAAAGCCAG
TTGTTTATCG TGGATACGAA AAATCCGGGC GTCAAAATGG GAGACCGGGA AAAGACCCTG
GGCATGTATG CCCTTGAAAT GAACCGGGTG GTTTTTGAAA ACTGCGAAGT GCCGGCCGAA
GACCGGCTGG GCGGTGAGGA AGGGTGTGAT TTTGACGCTT TCCTTCAGCG CTCCCGGGTC
GGTATGGCCG CCATGGCTGC GGGTGTGACC AACGCCTCCT ACCTGTTTGC CCGTGAATAT
GCCAAGACAC GGGTTCAGTT CGGCCAACCC ATTGCATATC GCCAGTCCGT GGCCTTCATG
CTGGCGGAGA TGGCCTACGA GGTGGATTCC ATTCGTCTGA TGGCGTGGAA AGCCGCATCG
GCCCTTGAGG CCGGCAAAAA CGCGACACGG GAAGCCTACC TGGCAAAGAT GTATGCCGGT
GAAATGGCCA TGAAGATGTG CGACTACGGT GTTCAGCTCA TGGGCGGACA CGGATACATC
CGCGAATACC CGGTGGAGCG TTACTACAGA AACGCCAGAG GGTTTTCCAA TCTCGAGGCC
ATGGCCACCA TCTAG
 
Protein sequence
MINFSMSKQQ QMVKKEVAKL VKNIVADTAH DMDESGQIPA DAIDKAWGLG ASISMVPEEY 
GGYGMADSPL ETALVLEELA FGDMAFAVAV TAPSLFITPV AKMGTEDQKK KYLPLFCKEE
YAACTMALNE PRFGFDAVDL KTTAEKKGGA YVLNGEKCFV PMGANASHML VAANLDGKSQ
LFIVDTKNPG VKMGDREKTL GMYALEMNRV VFENCEVPAE DRLGGEEGCD FDAFLQRSRV
GMAAMAAGVT NASYLFAREY AKTRVQFGQP IAYRQSVAFM LAEMAYEVDS IRLMAWKAAS
ALEAGKNATR EAYLAKMYAG EMAMKMCDYG VQLMGGHGYI REYPVERYYR NARGFSNLEA
MATI