| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3089 |
|---|
| Symbol | |
|---|
| ID | 5695949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 3701524 |
|---|
| End bp | 3702477 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641265706 |
|---|
| Product | Type II site-specific deoxyribonuclease |
|---|
| Protein accession | YP_001530969 |
|---|
| Protein GI | 158523099 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAA AAAAAGACCA TATTAAAGCC GCGCGACAGA TTCTAATTTC ATTGGGTCTG
CCAAGGGCAC AACAAAACGA ACGCTCGGCG CTTTGCCTGC TGGCCCTCCT GAATCTTCCG
CCGGGCAAGC CCTGGACCAA GGCGGAAAAT CCGCTTATCG GCATCACGCC GATAATGGAC
TGGGCCCGCA AACACTACGG GAAAGACTAT GCACCCAACA CCCGGGAGAC GGTCCGACGG
CAGTCCATGC ATCAGTTTGT GGATGCCGGA ATCGCGCTTT ACAACCCCGA TCAACCCGAT
CGACCGGTAA ACAGCCCCAA AGCCGTTTAT CAAATAGAGC CGGCTACGTT GGCCTTGCTT
CGCAGTTTTG GCACTCGGAA ATGGAACAGG AATCTGGCGT CTTATTTGGA TGAACGGGAA
ACGCTGGCCG CGCGTTATGC CATGGCGCGG GAACAAAACC GCATCCCGGT ACAGATCGCG
CCGGGAAAAC GAATAACCCT GAGCCCCGGG GAACACAACG AATTGATCCG AGCCATCGTT
GAAGACTTTG CTTCTCGTTT CGCGCCCGGC AGCATACTGG TATATGCCGG TGACACCGGC
GACAAGTGGG GCTACTTCGA TGCCCCGCTA CTGTCCGCTT TGGGCGTTGA CGTTGACGCT
CATGGGAAAA TGCCGGACGT GGTGTTGCAT TATTCAAAAA AGAACTGGTT GTTGATGGTT
GAATCAGTCA CCAGTCACGG ACCGGTTGAC GGCAAGCGGC ACGCTGAATT GACGCGACTG
TTTGCCGGAG CAAAGGCCGG GCTGGTGTAT GTAACTGCTT TTCCAAACCG TGCCGTCATG
GCCCGTTACC TGGCTGATAT CGCATGGGAA ACAGAAGTGT GGGTGGCCGA TGCCCCCTCG
CATCTCATTC ATTTTGATGG CGAACGCTTC CTCGGTCCTT ATTCCCCATC ATAA
|
|---|
| Protein sequence | MKRKKDHIKA ARQILISLGL PRAQQNERSA LCLLALLNLP PGKPWTKAEN PLIGITPIMD
WARKHYGKDY APNTRETVRR QSMHQFVDAG IALYNPDQPD RPVNSPKAVY QIEPATLALL
RSFGTRKWNR NLASYLDERE TLAARYAMAR EQNRIPVQIA PGKRITLSPG EHNELIRAIV
EDFASRFAPG SILVYAGDTG DKWGYFDAPL LSALGVDVDA HGKMPDVVLH YSKKNWLLMV
ESVTSHGPVD GKRHAELTRL FAGAKAGLVY VTAFPNRAVM ARYLADIAWE TEVWVADAPS
HLIHFDGERF LGPYSPS
|
|---|
| |