| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3074 |
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| Symbol | |
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| ID | 5695934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3683276 |
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| End bp | 3684670 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641265691 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001530954 |
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| Protein GI | 158523084 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000735359 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCATGC GGGATGGTCG TTCCAGAGGT GCGGGGTTGT GTGTGCTGGT GGTGTTGACG
TTGATGCTGA TGCTGGCAGG AAAGCCGGAA AGCGGAATTG CGGCGGATGC CGATACAAAC
GGAGTGCAGC AAACAGTGGC GGAGAGCCTG GAAGCCCTCT GGACCGGCAG GACGTTCAGC
CCGGAGCTGC AGCAGCGGCA GCAGGCCATG AAAACGTTGC TGCAGAATGG AGCCGTAACC
CGGGCCGACC TGGTAAGCAT GATGGAAACC GCGTTTCTTC CCATGCTGGA CCGGGCCGTC
ACGTCCCGGT ATATCCTGAA AGCCATGGCC AGGGATTTTG ACGCCGTTTT CGCGCCCCAC
ATGACATGGG AGGATGGGCG CGAAATGATG TGGCGGGTCA GCACGTCGGT GGTAAAGAAG
GGGGACCAGG TGTTGATTAA AATCGGCACA CTGGCGCCGC CGGGAACACC GTGGCTGAGC
GTTCCCGAGA CCATTACCAT TCCCGAGATC GAAAAAATGA CTGAGGGAAG GGTGACCGTC
AAGATATACG GCGGCGGCGT CATGGGCGAG GATACCGATA TTTTAAGAAA GATGGATATC
GGCCAGCTCG ACGGCTGCGG CTGCACCTCC CTGGGCGTGC TGGCCGCTTC CCCGGAAACC
TCTGTTTTTC TGGTGCCCGG CCTGTTCAAG AGCTATGACG AAGTGGATTA TGTCTATGAA
AAGTTTCGCA AGCGCCTGGA CCGGGCCTTT GAAGAAAAGG GATATATTCT GGCAGCCCTG
ATCGACACCG GTTTTTTCCA CATCTTTTCA AAAAACAGGA TCGCCGGGCT GGAGGATGTG
AAAAAGCAGA AGATGCTGAC CTGGTTTGGC ATCATGGAGA CCACCCTGTA TAACGAGCTG
GGCATCAACC CCACGCCCGT GGCCGTGCCC GAGGTGGTGT CCGCCTTGAG CACGGGCCTG
GCCAACACCA ACCTGGCGCC GGCCGCCTGG ATGCTGGGCA TGCAGGCCTA CCAGTACGCC
AACTACTATC TGACCCCGGC TCTGATGTAT TCCCCGGCGG CCATTGTGGT CAGCACCAAA
ACGAAGGACC GGATTCAGAA GCAGGTGGGG GTCTCGGACA ACTACGCCCA GAACTTCCAG
GAGATCATTG TTTCCGAGTT CAATCTCATT GAGGGGGAGT GGCGGCGTCA GATTCGGGTT
TATGACGCCA AAAGCCTGAA AGCTTTTGAA ACCAAGTGCG GTATGAAGGC CATGACCTTT
TCCGCCGAAG ATCAGAAGCT TATTGAGCAG GCGGGTATCG CGGTTCGGGA AAAGCTGGCC
GGCAAAGCTT ATCCGGCGGA CCTGCTTAAC GAGATCCTGG CGGCCCTGGA GGAGTTCCGG
AAATCGCACC CGTAA
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| Protein sequence | MFMRDGRSRG AGLCVLVVLT LMLMLAGKPE SGIAADADTN GVQQTVAESL EALWTGRTFS
PELQQRQQAM KTLLQNGAVT RADLVSMMET AFLPMLDRAV TSRYILKAMA RDFDAVFAPH
MTWEDGREMM WRVSTSVVKK GDQVLIKIGT LAPPGTPWLS VPETITIPEI EKMTEGRVTV
KIYGGGVMGE DTDILRKMDI GQLDGCGCTS LGVLAASPET SVFLVPGLFK SYDEVDYVYE
KFRKRLDRAF EEKGYILAAL IDTGFFHIFS KNRIAGLEDV KKQKMLTWFG IMETTLYNEL
GINPTPVAVP EVVSALSTGL ANTNLAPAAW MLGMQAYQYA NYYLTPALMY SPAAIVVSTK
TKDRIQKQVG VSDNYAQNFQ EIIVSEFNLI EGEWRRQIRV YDAKSLKAFE TKCGMKAMTF
SAEDQKLIEQ AGIAVREKLA GKAYPADLLN EILAALEEFR KSHP
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