Gene Dole_3063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_3063 
Symbol 
ID5695923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3670964 
End bp3673099 
Gene Length2136 bp 
Protein Length711 aa 
Translation table11 
GC content59% 
IMG OID641265680 
ProductCoA-binding domain-containing protein 
Protein accessionYP_001530943 
Protein GI158523073 
COG category[C] Energy production and conversion 
COG ID[COG1042] Acyl-CoA synthetase (NDP forming) 
TIGRFAM ID[TIGR02717] acetyl coenzyme A synthetase (ADP forming), alpha domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0980469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAC TGGATGCCAT TTTTTCCCCC AAGTCCGTGG CCGTGCTGGG GGCATCCACC 
ACCCCGGGCA AGGTGGGGCA CGATCTGTTT GAAAACATCC TGCGGGGCCG GTTCAACGGC
ACCCTTTACC CCGTCAATCC CAAAGCCGAT TCCATTCTCT GCGTCAAGGC CTACCCCAGC
CTGCTGGAGG TGCCGGACGC GGTGGACCTG GCCATGATCA TCCTGCCGCC CAAAGCCACA
CTGGCCGCCA TCCACGACTG CATCGAAAAA AAGGTAAAAG GCGTAGTGAT CGTTTCCGCG
GGTTTCCGTG AAGTGGGCGG GGAAGGCAAG CAGATCGAAG AGAGTGTGGC CGCCCTGTGC
CGGAAGGCGG GCATCCGGGT GGTGGGGCCC AACTGCCTGG GTGTGATCAA TCCCAACAGC
AAGGTGCGGC TGAACGCCAG CTTTTCCCGC CGCATGCCGA GCCAGGGCAA CATCTCTTTT
ATCTCCCAGA GCGGGGCGCT CTGCACCGCG GTGCTGGACT TTGCCTCGGA CATGGGGGTG
GGTTTTTCAA AATTCATCTC CACGGGCAAC AAAGCAGACG TGGATGAACT GGACCTTCTG
ACCTACCTTC ACAAGGACCC GGCCACCGAT GTAATCATGA TGTATATCGA GGAGCTCAAG
CGTGGCGGCC AGGAGTTTGT CGACGCGGTG CGTAAAATCA CTTCCTGCAA AAACCCCACC
CCCATTCTGG CCATCAAGTC GGGCCGGACC GGGGCCGGGG CCGCGGCCGC CTCCTCCCAC
ACCGGATCCA TTGCCGGTTC CGAGGGTGTG TATGACGCCA TCTTCGCTGA AACCGGCATC
ATCCGGGTCG ATTCTGTCAA TGAGCTCTTC GATTATGCCG GGGCCTTTGC CACCAAAAAA
TTTCCCATGG GCAAACGCAT CGCCATTGTC ACCAATGCCG GGGGTCCGGG CATTGTGGCC
ACGGACATGA CCGAGGTCAG CGGCCTGGAA CTGGCCCGGT TTTCTCCGGA AACCATTGAA
TCCCTGGCCA GCCACCTGCC GCCCACGGCC AATATTCACA ACCCGGTGGA CGTGATCGGC
GACGCTGACC CGGAGCGATA CCAGGCGGCC TTGGACGCGG TGATCCGGGA CGAAAACACC
GACAGTGCCC TGGTGATTCT GACCCCCCAG TCCATGACCA ACGCCATCAA GGTGGCCCGG
GTAATTTCAA AAATCGCCCG GCGTACCCCC AAGCCGGTGG TATGCGCCTT CATGGGCGTG
ATCGACGTAT CCGAGGGGGT GCGCCACCTG CAGGAAAACC ACATTCCGGT CTACCGGTTT
CCGGAAAACG CGGCCAAGGC CATTGCCGCC CTTTACCGGT CCGAGCAGTG GGTTCATCGC
CAGTACCTGG CCCAGTTTAC CTTTTCGCAC GACAAGAAAC GGGCCAGACA GATCTTTGAG
ACCTGCCGAC AAGAGGGCCA GACCTATCTC GGTGAACTGG AAGGCAACGA AGTGCTGTCC
TGCTACGGCT TTTCCGTGCT GCCCACAAAA CTGGCCGAAA CCCCGGAACA GGCCGTGGCC
ATTGCAAAGG AGATGGGATA TCCGGTGGTC ATGAAAATTG TCTCGCCCCA GATCATTCAC
AAGTCTGAAG CCGACGGCGT CAGGGTCGGG CTGAAAACAG ACAAAGAAGT GAACGCCGCC
TTTGACGAAA TCGTGGCCGG GGCCCGGGCC TACAACCCGA AGGCCCATAT CCGCGGTGTA
CTGGTCCAGA AATTCTCGCC GGCCGGCCAG GAGGTGATCC TGGGCGTTAA CCGCTATCCC
GGGTTCGGCC ACCTGCTCAT GTTCGGCCTG GGCGGCATTT TTGTTGAGCT GTTCAAGGAC
GTGGTGTTCC GCCTGGCCCC CATCGGCCGG AACAACGCGG TGCGCATGAT CAAAAGCATC
CGGTCGTTTC CCATGCTCGA CGGTTTTCGG GGAAAGCCCA AAAGCGACAT TGCCGTGCTT
CAGAAACTTC TGGTCTGCCT GTCCGACATG GTGATGGACA ACCCGGAAAT CGTGGAGCTG
GACATCAACC CCCTGATCGT CCATGACCAG GGCAAGGGGG CCACAGTGGC CGATGTACGC
ATTATTATTG ATCCACCGGA TACATGCAAA AAATGA
 
Protein sequence
MNQLDAIFSP KSVAVLGAST TPGKVGHDLF ENILRGRFNG TLYPVNPKAD SILCVKAYPS 
LLEVPDAVDL AMIILPPKAT LAAIHDCIEK KVKGVVIVSA GFREVGGEGK QIEESVAALC
RKAGIRVVGP NCLGVINPNS KVRLNASFSR RMPSQGNISF ISQSGALCTA VLDFASDMGV
GFSKFISTGN KADVDELDLL TYLHKDPATD VIMMYIEELK RGGQEFVDAV RKITSCKNPT
PILAIKSGRT GAGAAAASSH TGSIAGSEGV YDAIFAETGI IRVDSVNELF DYAGAFATKK
FPMGKRIAIV TNAGGPGIVA TDMTEVSGLE LARFSPETIE SLASHLPPTA NIHNPVDVIG
DADPERYQAA LDAVIRDENT DSALVILTPQ SMTNAIKVAR VISKIARRTP KPVVCAFMGV
IDVSEGVRHL QENHIPVYRF PENAAKAIAA LYRSEQWVHR QYLAQFTFSH DKKRARQIFE
TCRQEGQTYL GELEGNEVLS CYGFSVLPTK LAETPEQAVA IAKEMGYPVV MKIVSPQIIH
KSEADGVRVG LKTDKEVNAA FDEIVAGARA YNPKAHIRGV LVQKFSPAGQ EVILGVNRYP
GFGHLLMFGL GGIFVELFKD VVFRLAPIGR NNAVRMIKSI RSFPMLDGFR GKPKSDIAVL
QKLLVCLSDM VMDNPEIVEL DINPLIVHDQ GKGATVADVR IIIDPPDTCK K