| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3060 |
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| Symbol | |
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| ID | 5695920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3667198 |
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| End bp | 3668673 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641265677 |
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| Product | L-seryl-tRNA(Sec) selenium transferase |
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| Protein accession | YP_001530940 |
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| Protein GI | 158523070 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000814567 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAGA ATGACCATCA GGACCCCCCG CAGGACAAGG ACCGGCAGCG CCAGCTGCGA
CTGCTGCCCG GCGTGGACCG GCTTGTGGAA CAACTGACCG GAGCAGCCGG GCTTGAGACC
GTTCCTGTGT CGGTACTCAC CGATGCGGCC CGGTCAACCG TGGCCGGCCT GCGGCAGGCC
ATTCTTTCGG CAAAAAAAGG GCTTGCCGAA ACCGAGCTGG CCATCGACGC CGTTGTGATG
CGGGCCGCTC AGGCGGCCCG GACCGCCATG GCGCCCAATT TAAAACCGGT GATCAATGCC
ACGGGCGTGG TGATTCACAC CAACCTGGGC CGGTCCCCGC TGTCCAGAGA GGCCATCGAC
CACCTGGTGG CTGTGGCCTC GGGTTATTCC AACCTTGAAT TTGACCTTTC AAAAGGCGAG
CGGGGCATTC GGTACGCCGC CATCGAAGAC CTGCTGTGCC GACTGACCGG GGCACCGGCC
GCCATGGCGG TAAACAACAA TGCCGGGGCC GTGCTGCTGG CCGTGGAGAC CTTTGCCAGG
GACCGGGAGG TGATTGTCTC CCGGGGCGAG CTGGTGGAGA TCGGCGGGTC GTTTCGCATT
CCCGACGTGA TTCGAAAAAG CGGCGCCATC TTAAAAGAGG TGGGCACCAC CAACCGGACC
CACCTGAAAG ATTACGAGAA TGCCGTTTCG GAAAAAACCG GCCTGCTGCT CAAGGTCCAC
ACCAGCAACT ACGGCATGGT TGGATTTACC GCCGAAGTCG ACCTTGCGGG CCTGGTGGAG
CTGGGCCGGC ACCGCAACAT TCCGGTGATG CACGACCTGG GCAGCGGCAC CCTGATCGAT
TTTAAGGAGT TCGGCTTTCC CCACGAGCCC ACGGTGCCCG AGATTGTTGC CACCGGCGCG
GACGTGGTCA CCTTCAGCGG AGACAAGCTG CTGGGCGGGC CCCAGGCCGG CATGATCGTG
GGCAAAAATG AGGCCGTGGC CGCCATACGC GCCAATCCGA TTACCCGTGC CCTGCGCATC
GACAAGCTGA CCCTGGCGGC CCTTGAAATG ACGCTGCGGG CCTACCGGGA CAAACCCGCG
GCCATCAGAA ACATACCCAC CCTGCGCATG CTGACCGAGC CGTTGGCGGT GGTGGAACAG
AAGGCCGCGG CCCTGGCCGA TGAACTGAAA AACCTGGATG GTACCCGCCT GGCCGTTGAG
CAGGTACCCC TGGTGTCAAA GGCCGGGGGC GGCTCCCTGC CGTTTCTTGA AATTCCCAGC
AGCGGCGTGG CGGTGTCCGT GGAGGGGATT TCAGCCAACC GGCTGGAAAA CCTCTTGCGC
GCCGGGAATC CGCCCCTGAT CGGCCGGATC GAGCAGGACC GGTTTATCAT GGACCTGCGC
ACCGTTGCGC AATCCGAAAT TTCTGTTATA AAGGAAATTT TTGCCGCCCT GGCAGCGGCG
GCAAACGGCT CCGATGGCCA TACAAAGGAT TGCTGA
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| Protein sequence | MKQNDHQDPP QDKDRQRQLR LLPGVDRLVE QLTGAAGLET VPVSVLTDAA RSTVAGLRQA
ILSAKKGLAE TELAIDAVVM RAAQAARTAM APNLKPVINA TGVVIHTNLG RSPLSREAID
HLVAVASGYS NLEFDLSKGE RGIRYAAIED LLCRLTGAPA AMAVNNNAGA VLLAVETFAR
DREVIVSRGE LVEIGGSFRI PDVIRKSGAI LKEVGTTNRT HLKDYENAVS EKTGLLLKVH
TSNYGMVGFT AEVDLAGLVE LGRHRNIPVM HDLGSGTLID FKEFGFPHEP TVPEIVATGA
DVVTFSGDKL LGGPQAGMIV GKNEAVAAIR ANPITRALRI DKLTLAALEM TLRAYRDKPA
AIRNIPTLRM LTEPLAVVEQ KAAALADELK NLDGTRLAVE QVPLVSKAGG GSLPFLEIPS
SGVAVSVEGI SANRLENLLR AGNPPLIGRI EQDRFIMDLR TVAQSEISVI KEIFAALAAA
ANGSDGHTKD C
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