| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3053 |
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| Symbol | |
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| ID | 5695913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3660128 |
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| End bp | 3661210 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641265670 |
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| Product | twitching motility protein |
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| Protein accession | YP_001530933 |
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| Protein GI | 158523063 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAA TTGATGCATT TTTCAGGCTG ATGCACGAGC AGGGCGCGTC AGACCTTCAC
CTGCTCAGCG GTTTGCAGCC CGCTCTCAGG GTTCGGGGCG ATATCGAGCG GGTCAAGTAC
AAAGTCCTGG AAAACGACGA CCTTCGGGCC ATGCTTTACG AGATCGCCCC TGAAGAAAAG
GTCAAGGTGT TTGAAGAGAC CGGGGACGTG GACTTCGGTT ACGAGATTCA GGGCCTGGCC
CGGTACCGCG TCAATTTTTT CATGCAGAGA AACGGCGTGG GCGCCGTGTT CCGGGAGATT
CCCAGCACCA TTCTCAATGC CGAGCAGCTG GGCCTGCCGC CGGTGGTGCC CAGGCTGGCC
TCCCTTCCCC GGGGGCTGGT GCTGCTGACC GGCCCTACCG GCAGCGGTAA GTCCACCACC
CTGGCCGCCA TCGTGGACGA GGCCAACCGG ACCCGGAAAG ATAACATCAT CACCGTTGAA
GACCCCATTG AGTTTGTTCA CGAAAGCAAG AGCTGCATCG TGAGCCACCG GGAGGTGGGC
ATTCACACCA AGTCCTTTTC CGCGGCCCTT CGCGGTGCCC TTCGCGAGGA CCCGGACATC
ATTCTGGTGG GCGAAATGCG GGACCTGGAA ACCATCTCCC TGGCCATTGA GGCGTCGGCC
ACCGGTCACC TGGTGTTCGG CACCCTGCAT ACCACCAGCG CGGCCAAGAC CGTGGATCGT
ATCATTGAGG TGTTTCCGGC CGAACAGCAG GCCCAGATTC GCTCCACCCT GGCCGACGGC
ATTCGGGCGG TCATCTCCCA GGTGCTGTTC AAGCGCATCG ACAAGATCGG CCGGTGCGTG
GCTCCGGAGA TTCTCATCGC CACCCCGGCG GTGCGCAACC TGATCCGTGA GTCCAAGACC
CACCAGCTGC CCTCCATGAT GCAGACCGGT AAAAAATACG GCATGCAGCT TCTGGATGAC
GCCATCATGA TGCTGTATCA CAGGGGGTGG ATCAGCGCGG AAGAGGCATA CAACAAGGCC
AACGACAAGT CCCAGTTCAG GGGCTTTCTC AAGAGCACGC CCAAGGATTT TACAGAGGCA
TGA
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| Protein sequence | MAKIDAFFRL MHEQGASDLH LLSGLQPALR VRGDIERVKY KVLENDDLRA MLYEIAPEEK
VKVFEETGDV DFGYEIQGLA RYRVNFFMQR NGVGAVFREI PSTILNAEQL GLPPVVPRLA
SLPRGLVLLT GPTGSGKSTT LAAIVDEANR TRKDNIITVE DPIEFVHESK SCIVSHREVG
IHTKSFSAAL RGALREDPDI ILVGEMRDLE TISLAIEASA TGHLVFGTLH TTSAAKTVDR
IIEVFPAEQQ AQIRSTLADG IRAVISQVLF KRIDKIGRCV APEILIATPA VRNLIRESKT
HQLPSMMQTG KKYGMQLLDD AIMMLYHRGW ISAEEAYNKA NDKSQFRGFL KSTPKDFTEA
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