Gene Dole_3041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_3041 
SymbolrplT 
ID5695901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3648793 
End bp3649143 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content57% 
IMG OID641265658 
Product50S ribosomal protein L20 
Protein accessionYP_001530921 
Protein GI158523051 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000250393 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATCA AAAGAGGATT CAAGGCGAGA CATCGCCGTA AAAAGATTTT AAAGCTTGCC 
AAGGGATTCC GGGGCGGGCA CAGCAAGCTG TTCAAGACGG CGAAAAACAC CGTTGACAAG
GCCCTGGGTT ATGCCTACCG GGACCGCAAG CAGCGCAAGC GGGATTTCCG GCGGTTGTGG
ATCGCCCGCA TCAACGCGGC CGTGCGCATG CACAGCCTGA GCTACAGCCG TTTCATGCAC
GGCCTGAAAA AGGCCGGTGT GGAGCTGGAC AGAAAAGTGC TGGCCGAGCT GGCCATATCC
GACCCCTCTG GTTTTTCCAA AGTGGTGGCG GTAGCGGCGG AACAGCAATA A
 
Protein sequence
MRIKRGFKAR HRRKKILKLA KGFRGGHSKL FKTAKNTVDK ALGYAYRDRK QRKRDFRRLW 
IARINAAVRM HSLSYSRFMH GLKKAGVELD RKVLAELAIS DPSGFSKVVA VAAEQQ