Gene Dole_3040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_3040 
SymbolpheS 
ID5695900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3647656 
End bp3648660 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content60% 
IMG OID641265657 
Productphenylalanyl-tRNA synthetase subunit alpha 
Protein accessionYP_001530920 
Protein GI158523050 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000101786 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGAAT CTCTTGACGG CATAAAAGAG CGGGCCTTGC GGGAAATCGC GTCAGCCCGC 
GACACGGAAA CCCTTCAGTC CGTGTCCGTG AAATATCTGG GCCGCAAAGG CGCGGTCACC
CTTTTTCTGC GGAACCTCTC GCAACTGCCG GCCGAAGAGC GGCCCCGGGC CGGACAGGCG
GCCAACCAGG TCAAACAGGA CTTGCAGGCG GCCCTGGACC GGGCCACCGA ACAGATTGCC
GCGGATTCAG CCGCTGTTGA CGGCATTGAT GTCTCCCTTC CTGGCCGGCC GGTTTCCCGG
GGCACCCTGC ATCCCATCAC GCGCATCACC CGTCGTATCT GCGAGATTTT CGGCCGCATG
GGCTTCGATG TGGTGGAAGG CCCGGAAATT GAGACCGACT ACTACAATTT CGAGGCCCTC
AACATTCCCA AGCACCATCC TGCCCGGGAC ATGCAGGACA CTTTTTATAT CTCCGACAAC
GTGGTGCTGC GCACCCACAC CTCCCCCACT CAGCCCAGGG TCATGGAAAA AACGGCCCCG
CCGCTGCGCA TCATCGCGCC GGGCAAAGTG TACCGGTGCG ACTCCGATGT GACCCACACC
CCCATGTTTC ACCAGGTGGA AGGACTCATG GTGGACCGGA ATGTCTCCTT CGGCGATCTG
AAAGGGATAC TGACCCTTTT TATTCACCGG ATGTTTGACC CGGAGACCAG CCTGCGGTTC
CGGCCCAGCT ATTTTCCCTT TACCGAGCCC AGCGCCGAGG TGGACATTCG CTGCGTGGCC
TGCCGGGGCA AGGGATGCCG AATCTGCTCT CACACGGGCT GGCTGGAAAT CCTGGGTGCC
GGCATGGTGC ACCCGGCGGT GTTTGAAAAG GCGGGATACG ACACGCAGGC CTATACGGGC
TTTGCCTTCG GCATGGGAGT GGAGCGGATC GCCATGCTCA AGTACAACAT CGACGACACC
CGCAAATTCT TCGAAAACGA TACCCGGTTT TTAAGGCAAT TCTAA
 
Protein sequence
MTESLDGIKE RALREIASAR DTETLQSVSV KYLGRKGAVT LFLRNLSQLP AEERPRAGQA 
ANQVKQDLQA ALDRATEQIA ADSAAVDGID VSLPGRPVSR GTLHPITRIT RRICEIFGRM
GFDVVEGPEI ETDYYNFEAL NIPKHHPARD MQDTFYISDN VVLRTHTSPT QPRVMEKTAP
PLRIIAPGKV YRCDSDVTHT PMFHQVEGLM VDRNVSFGDL KGILTLFIHR MFDPETSLRF
RPSYFPFTEP SAEVDIRCVA CRGKGCRICS HTGWLEILGA GMVHPAVFEK AGYDTQAYTG
FAFGMGVERI AMLKYNIDDT RKFFENDTRF LRQF