| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3036 |
|---|
| Symbol | nusA |
|---|
| ID | 5695895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 3642574 |
|---|
| End bp | 3644001 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641265652 |
|---|
| Product | transcription elongation factor NusA |
|---|
| Protein accession | YP_001530916 |
|---|
| Protein GI | 158523046 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0195] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00201036 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCATAC AGGACGTGAA ACGTGTTGTA GAACAGGTCA GCCGGGACAA GGGCATTGAC
AGGGACACTC TTGTGAAGGC CCTTGAAGAG GCCATCAAGT CTGCGGCTCG GAAGCGGTAT
GGCGCGGCTA TCGATATCGA AACCATGTAT GATGAGGATA CCGGCGAAAT TGAGATATTC
CAGTTCAAGG AGGTGGTTGA AACCGTCCAG GACCCGGATC TGCAGATCAC GTTTGTGGAG
GGCAGGGCCC TGGATCCGGA GTGTGAACTG GGAGACAGCC TCGGTGTGAA GATGGACACG
CAGTCCTTTG GCCGTATCGC GGCCCAGTCG GCCAAGCAGG TTATTATTCA GAAGATGCGG
GAGGCGGAGC GAAGCGCGGT CTACAAGAAT TTCGTGGAAA AAGAGGGTGA GATCATCAAC
GGTATCGTCT CCCGCATGGA GCGCGGTAAC GTGATTGTCA ATATCGGCGA GGCCGAGGCG
ATTCTTAACT CCCGGGAACA GATTCCCGGC GAAGGCTACC GCCGGGGGGA CAGGGTGCGG
GCCAATGTGA TGAAAGTGCT TGAGGAGACC GCCGGCCCCC AGATTATCCT GTCCCGGGCC
CATCCGGATT TTGTGGTCAA TCTCTTCAAG ACGGAAGTGC CGGAAATCAG CGAAGGTATC
ATTACCATCA AGGCCATTGC CCGGGAGGCC GGCGGGCGGA CCAAGATCGC TGTGGTTTCC
AACGACATGG ATATCGACCC GGTGGGTGCC TGCGTGGGGG TCCGGGGCAA CCGGATTCAG
AACGTGGTCA AGGAGCTCAA AGGGGAAAAG ATCGATATCG TTCCCTGGAA CCCGGACCCG
GCCAAGTTCG TCTGCAACGC GCTTTCTCCG GCAGAGATAG CCCGTGTGAT CATCGACGAG
GACAATGCGG CCATGGAGAT CATCGTGCCC GACGAGTCCC ACTCTCTTGC CATCGGCCGA
AGAGGGCAGA ATGTGCGGCT TGCCTCCAAG CTGACCGGCT GGCACCTTGA TGTACAGAGC
GAGTCCATAT ACACCCAGGC CATGGAACGG GGGTATGACA CGCTTCTTCA GATACCCGGT
GTGGATGGGT CCCTGGCAAA TGCGCTGTGT GAAGTCGGGT TTTTCTCGGC GGATGATATT
TCCGGTGCCG CGGTTGATGA CCTGATTGAA CTGGAAGGCA TTGATGAAGC CTCGGCAAAG
GCGTTGATCC GTGACGCGGT CAAGGTTGCG GAGCAGGCAG CCAGGGAGCA GGCAATCAGG
GAGAAAGCAG CCAAAGAGCA GGCAGCCAAA GAACAGGCAG CCAGGGTGCA GGCGGCAGAA
GAAGCATCTC CGGCGCCAGA TGAAGAAGCG CCGAATAAAG AGGCGCCGGA TAACGACATT
GCGCCAGCCG GAGAGACCCC GGCGGATGAC GGCCATGAGC CGGTATAA
|
|---|
| Protein sequence | MIIQDVKRVV EQVSRDKGID RDTLVKALEE AIKSAARKRY GAAIDIETMY DEDTGEIEIF
QFKEVVETVQ DPDLQITFVE GRALDPECEL GDSLGVKMDT QSFGRIAAQS AKQVIIQKMR
EAERSAVYKN FVEKEGEIIN GIVSRMERGN VIVNIGEAEA ILNSREQIPG EGYRRGDRVR
ANVMKVLEET AGPQIILSRA HPDFVVNLFK TEVPEISEGI ITIKAIAREA GGRTKIAVVS
NDMDIDPVGA CVGVRGNRIQ NVVKELKGEK IDIVPWNPDP AKFVCNALSP AEIARVIIDE
DNAAMEIIVP DESHSLAIGR RGQNVRLASK LTGWHLDVQS ESIYTQAMER GYDTLLQIPG
VDGSLANALC EVGFFSADDI SGAAVDDLIE LEGIDEASAK ALIRDAVKVA EQAAREQAIR
EKAAKEQAAK EQAARVQAAE EASPAPDEEA PNKEAPDNDI APAGETPADD GHEPV
|
|---|
| |