| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3024 |
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| Symbol | |
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| ID | 5695883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3627018 |
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| End bp | 3630710 |
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| Gene Length | 3693 bp |
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| Protein Length | 1230 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641265640 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001530904 |
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| Protein GI | 158523034 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3401] Fibronectin type 3 domain-containing protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.446617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAAT GGATATGGTT TTTCGTTTCC GTTGTTCTTT TCCCCTGTAT TGTGTCCGCG
GTTCCCCAGG TCAATTACCT GGGCCAGCTG GAAGCGGACA AACCGGCAGC CCTTGCCGTG
GACCGGGATG ACACCCTCTA CATGATCTGC AACACCGGTT CCTCTTCGGG CTTCATCCGC
ATCCTCAACC AGAAAACCGG AGAGGAGATC CAGGTCGGGG GCAAGGACAA AGAGTGGAAA
GACATCCTTC GGCACCCCAC CGGGCTTGCG CTCTACAAAG ACCGGCTCTA TGTCACCGAT
GCCGGGCTCG ACAGAATCGC TGTTATTTCC AAAACCGGAG AGTTTATCGA AAGTTACGGC
AGCAAAGGAA GTGGCCCCGG CACGTTCAAC GACCCGGCCG ATATCTTTGT ACACAAGGGA
GTGATCTATG TAGCGGACAC CGATAACGAC CGCATTCAGG CGCTGGGCGA CAACGGGGTT
TTCCTGCACG AGATCGGGCC GGCCGATGCC CCGGAAAACC GGATGAAAAA GCCGGTGCAA
GTGGCGGTGG ATGTGTCGGG CCGTATTCAC GTTGTGACGA CCGACGGTCA GATCCGGGTT
TATCGGGCTG ACGGCGCCTT TCTCCAGATC GCCCCTTTCC CGCCGGCCAG TGCCGTGGCC
ATGGGCCCGG ACGGGGTGTT CGTGGCCGAT GCCAGTGCCC TTGCCGTGAA AAAATACAAC
CTTGATTTTG CGCCGGTGCT CTCTTTCGGC ACAAAAGGGG AAGGCCGCGC CCAGTTCCTG
GAGCTCTCCG CCCTGGCCCT GGGCGGGGAC GGAACGGTTT ACGTGGCCGA CGCCAAAACC
GGCAGAGTCC AGATATTTCT GCCCGAAGCC GGGGGGTGCA CCGCGCCGCT GGCCCTGGCG
CCCCCGCCTA CATCGGCCCG GTGGACACGG GCCATCGCTG TGGACCCGGA CCGGACGCTC
TCCTGTATCG TCGCCAGGGA AAACAATACC CTTTATGCCG TGGATGACAA AAAAGGGGTG
ATCTGCGTCT TCAAGGAAGG CGAGCCGGTC GCTGAAGTGG CGGTGGGCGA CGGCGTGGCG
CCCGAGTCGC TGGCCTTTGA CGCAGCAGGC GACATGTATG TGCTGGCCCG CCAGCAGGTC
ATCAAGGTAG ATCCCGACGG CAAGGTGAAC TATACCTTTG GCGTTTCGGG GAGTACCAGC
GTCTTCGGGG CCAAACCCGA CGACCTGGTG ATCACCCGGA CCGGTGCCGT ATGCGTCACC
GACAGAAAAG AAAAAAAGAT AAAAATCTAC AACACCGACG GCATCTTTAT TCGGGCCATT
ACCACCGCCG ACGGCCAGAC CCCGCTTCAG GAACCCATTG CCCTTGCCGC TGACGACACC
GGGGCGCTTT GCGTGCTGGA TGCCGGGCAT AAGGCGGTGT TCCGTTTTTC CCCGGACGGC
CTGTCCATAA ACGGTTTTGC GGTGGGCGAC GCCGCAGCGG TCCCCGTGGA CCTTGCGGTT
TCCAGAGACC ATGTATATGT GCTGGATGGT AAGGCCGGCC ATGTCCGGAT GTTTTCCCCG
GAGGGCCGCC AGCTGGCCCG TTTCGTGGCA ACCGGCTCTG AACCGGGAAG CCTGGACCGG
CCGGTTTCCA TAGCGGCAAG GGGCGATGCC GGGTTTCTCG TCTCCGATCC GGGCAACCAG
CGCATTCAGG CGTTTGCCGT TGTCTACACC CCGGACCCGC CGACCGGCGT AACAGCCCAG
GGCGGCCCGA GAAGCGTTTC TCTTGAATGG GAAAAAACCG GCAGCCGCCT GGTGGAGGGC
TACCGGATTT ACCGGATGGA ACAGACCGGA ACCCCCGGCT TAAGCGCCGT TGCCACAACA
GCGGACAACC ATTATGTGGA CACAACCCCC ATTCCGGGAA AAGCGTATCT TTACATGGTC
ACCGCCATGG CGGTTCAGGG AAACGAAAGC GCCCTGTCAT CCCCCTGTTT TGCCACCGCT
GAAAAGCTGA CCGCGCAACC GCCCACGGCC CTGGCCGCGC AACCCCAGGA CTTCTCCGTG
GACCTGGCAT GGCAGCCCAG CCCCTCTGCC CACCTGGCCG AATATGTGAT CTATCGCGAC
TCCGGGGAGA TCGCCCGGAC CACGGACACG AATTTTACAG ACACGGATCT GGCGCCGGAA
ACCGCCTATG AATATGCCGT CTCCGCGGTC AGTGTCGACG GCGTCGTCAG CGATGCCGTC
ACCGCCGCCG TTACCACCCG GGTGACCACC CGGCCCCCGG TGGAGATCGA CGTGATCAAG
CTGTCCGACA TCTTCTCCAA TACCTATAAA ACTTACGAAA CCAACGGCAT CGGCACAGTA
AACATCCGCA ACAACACCAA GGACCATATC TCCAGGCTCA ATGTGCTGTT TACCATCAAG
AACTTTATGG ATTTCGCCTC TGAAACCGTG ATCACCGACC TGGGGCCGGG CAAAAGCCAG
GTGGTGCCCG TCAAGGCGGT GTTCAACGAT AAAATCCTGG ACGTGACCGA AGACACACCG
GTGCAGACCG AGATCACCGC CGCCTATTAT GTAAGCGGTG AGCTGAAAAC CTTTTCCGCC
AAGCAGAGCA TCAATGTGTA TGAAAAGCAC AAGATGACCT GGGACGACGC AAAGCGGATC
GGCGCCTTTG TCACCACAAA GGATCCGGTG GTCATGGAGT TTGCACGGGC CGTCACCACC
CAGTACGAAC ACACGGCCGA CCCCCTGATC AGCGGCTGCA TTCTCTTTGA CGCCATGGGT
GCACTGGGCA TCCGCTACAC AAAAGACCCC TCCAACTCTT ATCAGGAGAC ACGGGACAAC
ACCCAGCTGA TTGACTATCT CCAGTATCCC AGGGAAACCC TTCAGCGCAA GTCCGGCGAC
TGCGATGACC TGGTGATTCT CTATGCCGCG GCACTGGAAA GCGTGGGCAT CAGGATCCGG
TTTGTCGAAG TGCCCGACCA CATCCTCATG ATGTTTGAAA TCAACGGCAC CCGGCACCTG
GGCACGGACA CCATGAACGA ACTGCTGGTG ATCGAGGATG AACGGGTATG GGTACCGGTG
GAGGTGACAA AGGTGGGCAA GCCCTTTGCC GATGCATGGG AAGCGGGCAG CCGGAACTAC
TATCGATGGA AGGGCCGGGA CCTTTCCTCC CTGGACCTTG ACACGGCATG GGCGGCATAC
AAGCCGGCCA ACCTGCCGGT GTCCGCCTTC AGGGTGCAGC CGATATCCCG TGAGGCCATG
GACAAGCGGT TTGACAATGA GTTTAATGTG ATTCGCAAAA CATGTGTAAA GATCCGGAAC
CGGGCACTGT TTGCCCGGCT GCAGGAGGCC CCGGACGACA ACGCGGCCCG GCTGCAACTG
GGCATCGCCT ATGCCGGATA CAGTGTTTAT GATGAGGCCC GCTCCCTGTT TAACGCGATC
CTGACGACCG AACCGGCCCA CGCCGCGGCC CTCAACAACA TGGGAAACAT CTTTTTTCTG
GAACAGGCTT ACGAAAAAGC GGCGGACGCC TATACCAGGG CGGCGGCCGC GGACCCCGAA
GACCCGCTGG TGCGGATCAA TCTTGCCATG TCCCTGCTGA AAACCGGGCA GAAAGCAGCG
GCCAAAAAAG CGTTTGACGA GGCCTGCGGC ATGTCGCCCG ATATCACCAA ACAGTATCGC
AGCCTGGGCC TTCAATTGAT CGGCGCCAGG TAG
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| Protein sequence | MRKWIWFFVS VVLFPCIVSA VPQVNYLGQL EADKPAALAV DRDDTLYMIC NTGSSSGFIR
ILNQKTGEEI QVGGKDKEWK DILRHPTGLA LYKDRLYVTD AGLDRIAVIS KTGEFIESYG
SKGSGPGTFN DPADIFVHKG VIYVADTDND RIQALGDNGV FLHEIGPADA PENRMKKPVQ
VAVDVSGRIH VVTTDGQIRV YRADGAFLQI APFPPASAVA MGPDGVFVAD ASALAVKKYN
LDFAPVLSFG TKGEGRAQFL ELSALALGGD GTVYVADAKT GRVQIFLPEA GGCTAPLALA
PPPTSARWTR AIAVDPDRTL SCIVARENNT LYAVDDKKGV ICVFKEGEPV AEVAVGDGVA
PESLAFDAAG DMYVLARQQV IKVDPDGKVN YTFGVSGSTS VFGAKPDDLV ITRTGAVCVT
DRKEKKIKIY NTDGIFIRAI TTADGQTPLQ EPIALAADDT GALCVLDAGH KAVFRFSPDG
LSINGFAVGD AAAVPVDLAV SRDHVYVLDG KAGHVRMFSP EGRQLARFVA TGSEPGSLDR
PVSIAARGDA GFLVSDPGNQ RIQAFAVVYT PDPPTGVTAQ GGPRSVSLEW EKTGSRLVEG
YRIYRMEQTG TPGLSAVATT ADNHYVDTTP IPGKAYLYMV TAMAVQGNES ALSSPCFATA
EKLTAQPPTA LAAQPQDFSV DLAWQPSPSA HLAEYVIYRD SGEIARTTDT NFTDTDLAPE
TAYEYAVSAV SVDGVVSDAV TAAVTTRVTT RPPVEIDVIK LSDIFSNTYK TYETNGIGTV
NIRNNTKDHI SRLNVLFTIK NFMDFASETV ITDLGPGKSQ VVPVKAVFND KILDVTEDTP
VQTEITAAYY VSGELKTFSA KQSINVYEKH KMTWDDAKRI GAFVTTKDPV VMEFARAVTT
QYEHTADPLI SGCILFDAMG ALGIRYTKDP SNSYQETRDN TQLIDYLQYP RETLQRKSGD
CDDLVILYAA ALESVGIRIR FVEVPDHILM MFEINGTRHL GTDTMNELLV IEDERVWVPV
EVTKVGKPFA DAWEAGSRNY YRWKGRDLSS LDLDTAWAAY KPANLPVSAF RVQPISREAM
DKRFDNEFNV IRKTCVKIRN RALFARLQEA PDDNAARLQL GIAYAGYSVY DEARSLFNAI
LTTEPAHAAA LNNMGNIFFL EQAYEKAADA YTRAAAADPE DPLVRINLAM SLLKTGQKAA
AKKAFDEACG MSPDITKQYR SLGLQLIGAR
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