| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3016 |
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| Symbol | |
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| ID | 5695875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3619337 |
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| End bp | 3620617 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641265632 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001530896 |
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| Protein GI | 158523026 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAG CCGGTCGGGC CGCTTGTGTG CTGCTTGTTG TCCTTGTCAC CGGACTGGGT
CTTTTCGCGG GGCCCGGTGT CGGGCAGGAG GTGCAATCCA CTGATATCAG CCAGGGCACG
GCGGTGTCAC CGTCAGGCAA CTGGCTCCGG ACAACCGTTT TCCCCGGTGT CACCTGGACA
TCCCTGCTGC TGTCCGCCTT GCTGATCGGC CTGGTGGTGG CAGTCGAACG GCTGCTGCGG
TGGCTGGTCT GGTATCGGGT CAGGCGCCGG GCCGAACAGG AAGGCCGAGC CCCGGCGGCC
ATCTTTTTTC TCGACGCACT ATCCGCCCCT TTTTCCGTGG CCTTTCTGGC GTACGGTATT
TATCTTTCCC TCTGGCCGGT GTACGGGGCC TTTGAAACAC CGGCGGGCAA TGCCGTCCTT
GATGCCTGCC ATGGCGGTGC CCGGCTTGTC GCTTATGTGA CGGCTGTCTG GTTTTTTGTC
CGGCTGGTGG CCCTGATCGA CGCCCGTCTC CAGCAGTGGG CCGCCTCCAC GGAGAGCACT
GTCGACGAAC TGCTGGTGCC CCTTGTGGGC AAGACACTGC GGGTTCTCAT CATCGTTCTG
GGGGCCGTGT TCCTGGTCCA GAATATGACC GGCGTGAAGA TCGGGCCGGT GCTGGCCTCC
CTGGGTATCG GCGGTATTGC CGTGGCCCTG GCCGCCAAGG ACTCCATTTC CAATTTTTTC
GGCACCCTGA CCATTGTTTT TGACAAGCCG TTTCACCCCG GGGACCGCAT CGTCATCGAA
GGCAACGACG GCGTGGTGGA GTTCGTGGGG TTCCGCAGCA CGCGCATTCG AACCCTGACC
GGTCACCTGC TGACCATTCC CAACGAAAAG ATCATCAGCT CCTTTGTGGA AAACATCAGC
CGGCGGCCCC ACATTCGATG GCTTACCAAT ATCGGGATTC CCTATGATAC GCGGCCGGAA
AAGGTGGAAC AGGCCGTGGC CATTATCAGG GAGATCCTGT CCGGTCACGA GGGCATGCGG
GAAGATTTTC CGCCCCGGGC CTTTTTCAAC AATTTTAATG ACTGGAGCCT CAACATCATG
GTGGTGGCCT GGTACCATCC CCCGGACTAC TGGGCCTTTC AGGCATGGGT GGAGCGGACC
TGCCTGGAGA TCATGCGCCG GTTTGAGGCA GAGGGCATTG ATTTTGCCTT TCCCTCCCGG
ACGGTTTATG TGGCCGGAGA CGACAAGCGC CGGGTCACCC TGAACCTGCC GGACACCCCG
GATCTGAAGA AAACGGAATA A
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| Protein sequence | MKPAGRAACV LLVVLVTGLG LFAGPGVGQE VQSTDISQGT AVSPSGNWLR TTVFPGVTWT
SLLLSALLIG LVVAVERLLR WLVWYRVRRR AEQEGRAPAA IFFLDALSAP FSVAFLAYGI
YLSLWPVYGA FETPAGNAVL DACHGGARLV AYVTAVWFFV RLVALIDARL QQWAASTEST
VDELLVPLVG KTLRVLIIVL GAVFLVQNMT GVKIGPVLAS LGIGGIAVAL AAKDSISNFF
GTLTIVFDKP FHPGDRIVIE GNDGVVEFVG FRSTRIRTLT GHLLTIPNEK IISSFVENIS
RRPHIRWLTN IGIPYDTRPE KVEQAVAIIR EILSGHEGMR EDFPPRAFFN NFNDWSLNIM
VVAWYHPPDY WAFQAWVERT CLEIMRRFEA EGIDFAFPSR TVYVAGDDKR RVTLNLPDTP
DLKKTE
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