Gene Dole_3012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_3012 
Symbol 
ID5695871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3614449 
End bp3615513 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content57% 
IMG OID641265628 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_001530892 
Protein GI158523022 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.815439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGGC TGCAGAAAAA AATGTCCAAC AAGGCCGGGC TTTCGCCGGG CACCCTGGTC 
CATATCGGGG AGAAGAAGGC CGACAGGGTT CGCCTCTCTT TGATTTCCTA TGACGGCGCC
CGGCTCCAGG AAAAGGAGAT CGGTTCCGTC GATGAGGTGC CCACCGAAAG AGACGGGAAG
ACCGTTACCT GGCTCAACGT GGACGGCCTG CACGATATCG CGGCCATTGA GGCCGTGGGC
CGCTGTTTCG GCCTTCACCC CCTGGTGATG GAGGATATTG TCAACACCGG CCAGCGACCC
AAGGCCGAAG ACCATGATGC CTATCTCTAT CTTGTCGTGC GCATGCTCTC CTATGACGTC
GAGGCTCACC GGGTGGTTTC AGAACAGTTG AGCGTGGTCC TTGGAAACGG ATACATTCTT
TCGTTCCAGG AGCGGCGGGG AGATGTGTTT GAACCGGTGC GGGAGCGCAT TCGAAAGGGC
AAGGGCGCCC TGCGCAAGAG CGGGGCCGAC TACCTGGCTT ATGCGTTGCT GGACGCGGTG
GTGGACCACT ATTTTGTTAT TCTGGAACAT CTCAATGCCC GGGTGGAAGA CCTGGAAGAG
GAGCTGCTCG GCGACCCCTC TCCGGACACG CTCAAGGCGA TTCATGCCAT CAAGAAAGAG
ATTCTTGCGT TTCACCGGCA GGTCTGGCCC CTGCGTGACA TGATGGTGCA GCTTAAAAAA
GGAGAGTTTG TCCATATCAG CAAAGCCACC CGGCTTTTTT TTCAGGATGT GTCCGACCAT
ACGGTGCGGG CACTGGAAAC CGCTGAATCC CTGCGGGACA GCCTCAACAG CCTTCAGGAC
CTTTATCTGT CCATCCTGAG CAACCGCATG AACGCGGTGA TGAAGGTGCT GACCATCATC
GCCACCCTCT TTATTCCACT GACCTTTATC GCCGGCATCT ACGGCATGAA CTTTGTCCAC
ATGCCCGAGC TCTCCTGGAA ATGGGGGTAT CCGGCGGTGT GGGCCGTGAT GATCACCGTG
GCCGCCGGCC TGCTGGTCTA TTTCAAGAAG AACCGGTGGC TATGA
 
Protein sequence
MLRLQKKMSN KAGLSPGTLV HIGEKKADRV RLSLISYDGA RLQEKEIGSV DEVPTERDGK 
TVTWLNVDGL HDIAAIEAVG RCFGLHPLVM EDIVNTGQRP KAEDHDAYLY LVVRMLSYDV
EAHRVVSEQL SVVLGNGYIL SFQERRGDVF EPVRERIRKG KGALRKSGAD YLAYALLDAV
VDHYFVILEH LNARVEDLEE ELLGDPSPDT LKAIHAIKKE ILAFHRQVWP LRDMMVQLKK
GEFVHISKAT RLFFQDVSDH TVRALETAES LRDSLNSLQD LYLSILSNRM NAVMKVLTII
ATLFIPLTFI AGIYGMNFVH MPELSWKWGY PAVWAVMITV AAGLLVYFKK NRWL