| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3009 |
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| Symbol | |
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| ID | 5695868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3611015 |
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| End bp | 3612262 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641265625 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001530889 |
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| Protein GI | 158523019 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000545529 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAT TCGCAGCGAT AATCATCATC AGCGCCGCAC TGGCCCTGTG CTTCGGCACG
GCCGGCATGT GCGAGGTCGG CGTGACCGAT ACCGAGATTC ACATCGGCCA GTGGGGTCCC
CAGACCGGCC CGGCCGCGCC CTGGGGCGCC GTGGCCCGGG GTACCGACGC CTACTTTAAA
ATGATCAATG CCGAAGGCGG CATTCACGGC CGCAAGCTGG TCCATCACTA TTTTGACGAT
GCCTACAACC CGGCCAAGAC CGTGGCCGGC GTCAAGCAGC TTCAGGAACA GGAGGGCATG
TTCGCCTGGG TCAGCGGCGT GGGCACGGCC ACGGGCCTGG CGGTCAAGGA CTACCTGATG
GAAAACAAGA TTCCCTGGAT CGGTCCGTCT GCCGGTTCCC GCCACTGGGT GGAGCCGCCC
CAGAAATACC TGTTCAACGT TTATCCCTTC TACATGGGCG ATGCCCAGCT CCTGTGCCAG
TATGCCGTTG AAACCATGGG CAAGAAGAAA ATTGCCATTG CCTTTCAGAA TGACGACTAC
GGCAAGCAGG GCGTGGAAGG CGCTGAGTAC CAGCTTAAAA AGGCGGGCCT GGAGCTGGCC
GTCAAGGTGC CGGTCAACGT GGCTGATACC GACATGATTC CCCATGTCAT GGAGCTGAAA
AAAGCCGGGG CCGACGCGGT GCTGCTGTTT GTCACCCCTG GTCATGTGGC CCGCATCATC
GGCACGGGCA AGGCCATGCA GTTTGAGCCC ACCTGGATGT CCACCTCCAC CTGCGGTGAC
TTTCCCCTGA TGATGGCCAT CACCAAGGGC CTTTGTAAGG GCCTGATCAC GGCATCTTTC
GGTCTTGCCG AACCCACGGG CCATGTGGGG GAAGTCCAGC TTCTTGATAA TCCGGTTCAG
AAAATGGTCG CCAAGTACAA GACCGATGCC TTTGACAAGT TCGCGGCCAA GGATGAACGG
TACGGCTACA CCTTTCTCGC GGGTATCGGC TTTGCCGAGC CCCTGGTGGA GGCCATCCGC
CGCTGTGGAA AGGACCTGAC CCGGGAGAAA CTGGTCAAGG AACTGGAAAA CATGAAGAAC
TTCAAGGGCG TCCTGGGCCG TATCAACTAC AAGCCCTTTG ACCCCAAGGA CCCCCTCTGT
CGCCTGGGCC AGGGAGAGGT CTTTCTCCAG GAGTGCACGG AAAACGGCGG ATCCAAGATC
CTGACCGACT GGGTAACAAC CACCTACCTG CCGTCAAAGG CGGAATAA
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| Protein sequence | MKRFAAIIII SAALALCFGT AGMCEVGVTD TEIHIGQWGP QTGPAAPWGA VARGTDAYFK
MINAEGGIHG RKLVHHYFDD AYNPAKTVAG VKQLQEQEGM FAWVSGVGTA TGLAVKDYLM
ENKIPWIGPS AGSRHWVEPP QKYLFNVYPF YMGDAQLLCQ YAVETMGKKK IAIAFQNDDY
GKQGVEGAEY QLKKAGLELA VKVPVNVADT DMIPHVMELK KAGADAVLLF VTPGHVARII
GTGKAMQFEP TWMSTSTCGD FPLMMAITKG LCKGLITASF GLAEPTGHVG EVQLLDNPVQ
KMVAKYKTDA FDKFAAKDER YGYTFLAGIG FAEPLVEAIR RCGKDLTREK LVKELENMKN
FKGVLGRINY KPFDPKDPLC RLGQGEVFLQ ECTENGGSKI LTDWVTTTYL PSKAE
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