Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_3008 |
Symbol | |
ID | 5695867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3610111 |
End bp | 3610938 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641265624 |
Product | ABC transporter-related protein |
Protein accession | YP_001530888 |
Protein GI | 158523018 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00336682 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTTT TTTCCGTCTC TTCACTTTCC ATGGTTTTCG GCGGCTTAAA GGCCCTGGAC GACATCACCT TTGATGTGGC CCAGGGTGAG GTGTTTGCCA TCATCGGCCC CAACGGCGCC GGGAAAACCA CCCTGTTCAA CTGCATCAAC TGCATCTACC CCCCTTCTTC CGGTGCCGTG GTCTTCAAGG GGGTCAACCT GGTGGGAAAG AAGCCGGACC GGGTGGCCAG GGCCGGTATT GCCCGCACCT TTCAGAACAT TGAGCTGTTC GACCGGATGA ACACCATGGA AAACATCATG GTGGGCCGTC ACCTCTTCAT GAAGACAGGT CTTTTCCGGG GCGGATTCAT GTGGGGCAAA CGCTCCTTTG CCGGAAAAGA GGAGCAGGCC CACCGCCGAA AGGTGGAGGA GATTATCGAC CTGCTGGAGC TTCAGGTGGT GCGAAACAGC TTTGTGGGGG CACTGCCCTA TGGCACCCGC AAGAAGATCG AGCTGGGCCG GGCACTGGCC GCCGAGCCCG AGCTCCTGCT GCTCGACGAG CCCTGCGCCG GCATGAATGC CGAGGAAAAA CAGGACATGG TGTTCTGGAT CAAGGACATT CAGGACGAAC TGGGCGTCAC CATCCTGCTC ATCGAACACG ACATGTCCAT GGTGATGGAC ATCTCCGATC GCATTCTGGC GTTGAATTTC GGCAAAACCA TCACCATCGG CACCCCGGAC CAGGTGCGGT GTCATCCGGA AGTGCTGAAG GCATACCTGG GAGAAGACGA GCAGGTGCAG GATGCCACAT GCGACATTCA GGCAACCGAT TCGGATGGAA AGGCTTAA
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Protein sequence | MTFFSVSSLS MVFGGLKALD DITFDVAQGE VFAIIGPNGA GKTTLFNCIN CIYPPSSGAV VFKGVNLVGK KPDRVARAGI ARTFQNIELF DRMNTMENIM VGRHLFMKTG LFRGGFMWGK RSFAGKEEQA HRRKVEEIID LLELQVVRNS FVGALPYGTR KKIELGRALA AEPELLLLDE PCAGMNAEEK QDMVFWIKDI QDELGVTILL IEHDMSMVMD ISDRILALNF GKTITIGTPD QVRCHPEVLK AYLGEDEQVQ DATCDIQATD SDGKA
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