| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3008 |
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| Symbol | |
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| ID | 5695867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3610111 |
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| End bp | 3610938 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641265624 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001530888 |
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| Protein GI | 158523018 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00336682 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTTT TTTCCGTCTC TTCACTTTCC ATGGTTTTCG GCGGCTTAAA GGCCCTGGAC
GACATCACCT TTGATGTGGC CCAGGGTGAG GTGTTTGCCA TCATCGGCCC CAACGGCGCC
GGGAAAACCA CCCTGTTCAA CTGCATCAAC TGCATCTACC CCCCTTCTTC CGGTGCCGTG
GTCTTCAAGG GGGTCAACCT GGTGGGAAAG AAGCCGGACC GGGTGGCCAG GGCCGGTATT
GCCCGCACCT TTCAGAACAT TGAGCTGTTC GACCGGATGA ACACCATGGA AAACATCATG
GTGGGCCGTC ACCTCTTCAT GAAGACAGGT CTTTTCCGGG GCGGATTCAT GTGGGGCAAA
CGCTCCTTTG CCGGAAAAGA GGAGCAGGCC CACCGCCGAA AGGTGGAGGA GATTATCGAC
CTGCTGGAGC TTCAGGTGGT GCGAAACAGC TTTGTGGGGG CACTGCCCTA TGGCACCCGC
AAGAAGATCG AGCTGGGCCG GGCACTGGCC GCCGAGCCCG AGCTCCTGCT GCTCGACGAG
CCCTGCGCCG GCATGAATGC CGAGGAAAAA CAGGACATGG TGTTCTGGAT CAAGGACATT
CAGGACGAAC TGGGCGTCAC CATCCTGCTC ATCGAACACG ACATGTCCAT GGTGATGGAC
ATCTCCGATC GCATTCTGGC GTTGAATTTC GGCAAAACCA TCACCATCGG CACCCCGGAC
CAGGTGCGGT GTCATCCGGA AGTGCTGAAG GCATACCTGG GAGAAGACGA GCAGGTGCAG
GATGCCACAT GCGACATTCA GGCAACCGAT TCGGATGGAA AGGCTTAA
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| Protein sequence | MTFFSVSSLS MVFGGLKALD DITFDVAQGE VFAIIGPNGA GKTTLFNCIN CIYPPSSGAV
VFKGVNLVGK KPDRVARAGI ARTFQNIELF DRMNTMENIM VGRHLFMKTG LFRGGFMWGK
RSFAGKEEQA HRRKVEEIID LLELQVVRNS FVGALPYGTR KKIELGRALA AEPELLLLDE
PCAGMNAEEK QDMVFWIKDI QDELGVTILL IEHDMSMVMD ISDRILALNF GKTITIGTPD
QVRCHPEVLK AYLGEDEQVQ DATCDIQATD SDGKA
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