Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_3006 |
Symbol | |
ID | 5695865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3607505 |
End bp | 3609328 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641265622 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001530886 |
Protein GI | 158523016 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000854556 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGAAA TACTGGCACA CGACGCCAAC GGCAACGCAC TGGCAACCAC CACGCCGGCC CTGTTCAAGG AGACGGTGGC GAAAAAGGGC GATACCGTTG CCATGCGGAA CAAAGATTTC GGCCTGTGGC ACGACATCTC CTGGCAGGAA TATTACGACA CGGCCCGGGC CATCGCCTGC GCCCTGGTCG ACATGGGACT TGAGAAAGGC GACCGGGTAG CCATCATCGG GGACAACTGC CCCGAGTGGG TCATGATCGA CATGGGCATT CAGTGCGCCG GCGGCGTGGC CGTGGGCATC TACACCACCA ACGCCTGGCA GGAGGTGGAG TATGTGATCA ACCATGCCGA GGCCCGCTTC TTTTTTGTAG AGAACGAAGA GCAGCTGGAC AAGTGGCTCT CCTTCCGGGA AAACGCGCCT TCCCTGAAAA AAGTCATCGT ATGGGATACC AAGGGGCTGC GGGAGTTTTC CGATCCCATG GTCATGGCCT ATGACCGGCT GGTGAAAGCC GGCCGGGCCA TGGACACCGC TGTTGTGGAT GCCCGCATGG CCGAACTTCG GCCGGAAGAC CTCTGCGTGC TGATCTACAC CTCCGGCACC ACCGGCATGC CCAAGGGCGC CATGCTCACC CACGGCAACG TCACCTGGAT GGCCCATGCC ATCGAACAGC AGAATCGCAT CGACAACAAG GACGAGGTGC TCTCCTTTCT GCCCCTGTGC CACATCTTTG AACGGCTTTT TTCCGTGTTT GCCCACATTC GCCACGGCTA CGTCGTCAAC TTTGTGGAAA AGCCGGACAC GGTGATGGAG AACATGCAGG AAGTCTCGCC CACCGTGGGA TACGCGGTGC CGCGAATCTG GGAAAAATAT TACTCCGGCA TCCGCATTCG CATGACCGAC GCCACCTGGG TCAAGAAATT GGCGTTCAAA GCGGCCCTGG CAATCGGCCA TAAACGGGCC ACCCTGAAAA TGAATTTCGA AAAGGTGCCG CTGTACCTGG AGGTGCTTTT TAACATCGGT TACTTTGCCG TGTTCCGGAA ACTCAAAAAA CGGCTGGGAT TTGACCGGCT GCGGGTGGCC TATTCCGGCG CGGCCCCGAT TTCGCCGGAG ATGCTCCGGG CCTACCAGGC CATCGGGGTG CGGCTGATTG AAGGCTACGG CCAGACCGAA GGCACCGGCG TCACCTGCAC GTCCCAGCTG GAGCGGGTCA AGTTCGGCAC CGTGGGCCGG CCCCTGCCCG GCTGCCAGGT GCGTATCGCT GAGGACGGCG AGATCCTGGT CAAGTCCCCG GGCGTGTTTG TGGGCTATTT CAAGGATGAA AAAGCCACAC AGGAGGCCTT GCAGGACGGA TGGCTCTACT CCGGCGACGT GGGCGTGCTT GACAGCGACG GCTTTCTGAA AATCACGGAC CGGAAAAAAG ACATCATCAT CACCGCCGGC GGCAAGAACA TCACCCCCCA GTATATCGAA AACAAACTCA AGGCCAGCCC CTACATCAAT GATGCCGTGG TCATCGGGGA CCGGCGCAAG TACCTTACCT CCCTGATCAT GCTGGACGAA GACAACGTGA TGAAGTTTGC CCAGGACAAC AAGATTCCCT TTTCCACTTA CGGCGACTTG ACCCAGAACA GCCAGATCAA GCAGCTGATC CAGCACGAGG TGGACGAGGT CAACAAGACC CTGGCCCGGG TGGAAAACAT TCGCAAGTTT TCCATCATTC CCAAGAAGCT CTACCAGGAA GACGGCGAGG TGACCCCCAC CATGAAGGTG AAGCGCAAAA AGGTGTACGA GGCGTTTTCC AACCTGATCG AGGCCATGTA TTAA
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Protein sequence | MTEILAHDAN GNALATTTPA LFKETVAKKG DTVAMRNKDF GLWHDISWQE YYDTARAIAC ALVDMGLEKG DRVAIIGDNC PEWVMIDMGI QCAGGVAVGI YTTNAWQEVE YVINHAEARF FFVENEEQLD KWLSFRENAP SLKKVIVWDT KGLREFSDPM VMAYDRLVKA GRAMDTAVVD ARMAELRPED LCVLIYTSGT TGMPKGAMLT HGNVTWMAHA IEQQNRIDNK DEVLSFLPLC HIFERLFSVF AHIRHGYVVN FVEKPDTVME NMQEVSPTVG YAVPRIWEKY YSGIRIRMTD ATWVKKLAFK AALAIGHKRA TLKMNFEKVP LYLEVLFNIG YFAVFRKLKK RLGFDRLRVA YSGAAPISPE MLRAYQAIGV RLIEGYGQTE GTGVTCTSQL ERVKFGTVGR PLPGCQVRIA EDGEILVKSP GVFVGYFKDE KATQEALQDG WLYSGDVGVL DSDGFLKITD RKKDIIITAG GKNITPQYIE NKLKASPYIN DAVVIGDRRK YLTSLIMLDE DNVMKFAQDN KIPFSTYGDL TQNSQIKQLI QHEVDEVNKT LARVENIRKF SIIPKKLYQE DGEVTPTMKV KRKKVYEAFS NLIEAMY
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