| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3002 |
|---|
| Symbol | |
|---|
| ID | 5695861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 3603430 |
|---|
| End bp | 3604155 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641265618 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001530882 |
|---|
| Protein GI | 158523012 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2121] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.349241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGTATAC ACAGACAAAA AATTATTGCG GCCCTCATTC CCTGGCTGGT CACGTTTCTG
GCCCGGCTCT GGTTCGGCAC GGTACGGGTG CGGATCGCGG ATAAAGATGT TTTTGACCAC
TATTTTACCA ACGGCCGGGA CACCGGTCAT GTGGTGGCCG GGGCCTGGCA CCGCAATGCC
ATTTTCTTTT TCTACTATTT TCGAAAACTG AAAAACGCGG GTATCATGAT CAGCAGCAGC
AAAGGCGGCG ATATCGCCGC CGGAATAGCC CGGCGGTTCG GTTATGACGT GGTGCGGGGC
TCCTCTTCCC AGGGCGGCAG AACCGCGCTG TTGAACATGG TGAGCTACAT GAAAACAAGC
CCGGTGCAGA TGATCTGCGG AACGCCGGTG GACGGGCCGC GGGGACCGGG CCGGAAGATG
AAAAAGGGAA TGCTGATACT GGCCAGGGAT GCCGGGGCCT TTTTTGTGCC CATGGCCTGT
TCGGGCAAAC GGGTGTTTAC TCTTCACAAG GCATGGGACA AAACCATTCT TCCCAAGCCC
TTTGCCACCA TGGTACTGAC CTTTGGCACG CCCATAAAAA TTGACCCGGA CATATCGGAA
GCGGATCTTG AGCTGTTGCG CCAGAAAGCG GAAACAGAAC TGGACGCCAT CACGGACCGG
GCCGACCATC TCTCCGGATA TGCCGACACA GCCGATTTTG CCGCTGCCGC GTCGGTTAAG
GAATAA
|
|---|
| Protein sequence | MRIHRQKIIA ALIPWLVTFL ARLWFGTVRV RIADKDVFDH YFTNGRDTGH VVAGAWHRNA
IFFFYYFRKL KNAGIMISSS KGGDIAAGIA RRFGYDVVRG SSSQGGRTAL LNMVSYMKTS
PVQMICGTPV DGPRGPGRKM KKGMLILARD AGAFFVPMAC SGKRVFTLHK AWDKTILPKP
FATMVLTFGT PIKIDPDISE ADLELLRQKA ETELDAITDR ADHLSGYADT ADFAAAASVK
E
|
|---|
| |