| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2989 |
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| Symbol | |
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| ID | 5695848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3588767 |
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| End bp | 3589696 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641265605 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_001530869 |
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| Protein GI | 158522999 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.786147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACT CTCATTTCGT TCCACTCAAA CCCATACCCA TAAAGGACCG TGTGTCCATG
GTATTTGTGT ACTACGGCCA GATTGATGTG AAAGACGGCG CTTTTGTGGT GGTGGATGAT
GTCAACGGCG AGCGGAAGCA CATTCCGGTA GGGTCGGTAG CATGCATCAT GCTGGAGCCC
GGCACCCGTA TCAGCCACGC CGCCGTGAAG CTGGCGGCCA CCACAGGAAC CTTGTTGATA
TGGGTTGGAG AAGCCGGAGT GAGGCTGTAC TCGGCGGGTC AGCCTGGTGG TGCCCGTTCG
GACAAGCTGC TGTATCAGGC CAAACTTGCC CTGGATGAAC AGTTGCGGCT GAAGGTAGTG
CGCCGAATGT TTGAAATCCG GTTTGGTGAA AAGCCGCCGG AACGCCGCAG TGTGGATCAG
CTACGCGGGA TCGAAGGCGC GCGGGTCAGA AAAATATATG AACTTATGGC AAAGCAGTAT
GGTGTGCCAT GGAAGGGCAG GCGCTATGAT CCTAAAGACT GGGAGTCCGG TGATGTTATA
AATAAATGTT TGAGCGCCGC CACATCATGC TTGTATGGCG TTACCGAAGC CGCCATTCTG
GCGGCCGGAT ACGCACCCGC TGTCGGCTTC ATCCATTCTG GAAAGCCACT GTCGTTTGTG
TATGATATTG CCGATATCTA TAAGTTTGAT ACAGTGGTGC CGGTGGCGTT TCGTGTGGCA
GCAAAAAAAC CGGCTCATCC GGACCGAGAG GTGAGGATCG CCTGCCGGGA TGCGTTTCGG
GAAACCCGGC TGCTTCAGAA AATTATTCCG GGAATAGAAG ATATCCTTTC AGCCGGTGGG
ATTAAGCCGC CTCCACCCCC TGAAGATGCC CAGCCTCCGG CAATACCGGA GCCTGAATCA
ATCGGAGACC AGGGTCACAG GAGCGCATAG
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| Protein sequence | MTDSHFVPLK PIPIKDRVSM VFVYYGQIDV KDGAFVVVDD VNGERKHIPV GSVACIMLEP
GTRISHAAVK LAATTGTLLI WVGEAGVRLY SAGQPGGARS DKLLYQAKLA LDEQLRLKVV
RRMFEIRFGE KPPERRSVDQ LRGIEGARVR KIYELMAKQY GVPWKGRRYD PKDWESGDVI
NKCLSAATSC LYGVTEAAIL AAGYAPAVGF IHSGKPLSFV YDIADIYKFD TVVPVAFRVA
AKKPAHPDRE VRIACRDAFR ETRLLQKIIP GIEDILSAGG IKPPPPPEDA QPPAIPEPES
IGDQGHRSA
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