| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2987 |
|---|
| Symbol | |
|---|
| ID | 5695846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 3587070 |
|---|
| End bp | 3587849 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641265603 |
|---|
| Product | CRISPR-associated Cas5 family protein |
|---|
| Protein accession | YP_001530867 |
|---|
| Protein GI | 158522997 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTATC TTTTATTCCG TCTTTACGGG CCAATGGCCA GTTGGGGAGA AATTGCCGTG
GGAGAAACCC GGCATACGGC AAACTATCCC GGCAGATCGG CCATTATCGG GTTGATGGCA
GCCGCCCTGG GAATCAAACG TTCCGAAACC GAAAACCAGC AGGCCCTGGA TCAGGGCTGT
TTAATCGCTG TTGAGGCCCG CTCGCACGGC AGCCTGCTTC GGGATTATCA CACCACCCAG
GTGCCGGATT CCGTCGGCGG TTTTGTTTAC AGGACACGCC GGGATGAACT GATTATCGGA
AAGCCTCGCC TGGGAACCAT CCTGTCCAGT CGTGAATACC GTCAGGATGC CTTGGCGGTG
TCGGCAGTAA GGGTTTTGCC GGGTGCCCGG TATGAGCTAC AAACGATAAA AACCCACCTT
GAACAGCCCA GGCTCCATGT GTATCTCGGC CGCAAATCGT GCCCCTTGTC AGCGCCCATG
AACCCGCAGA TAGATAAAAC CAGCCGTAAT TTTCATGAGG CCTTCCAGGC GTATGCACAT
CAACCCCTTT TGCCGGTTCA TCATTCCGGC AAAGAGGGGT TGTCGAAGCG CGATGCCTAC
TGGCTGGGGT TGGCTAACGA CCGCCATTAC TACTGGGAAG GAGAACCATC TGAGTTTTCC
GATACGATTG ATCTTAGCCG GGTTCAGACC AGGATCAGGC ATGACCAGCC GTTGTCGCGG
ACGCGCTGGC AATTCTCTCC GCGCCAGGAA CACTATTGGT ATTTTTCGGG AGGTGAATAA
|
|---|
| Protein sequence | MGYLLFRLYG PMASWGEIAV GETRHTANYP GRSAIIGLMA AALGIKRSET ENQQALDQGC
LIAVEARSHG SLLRDYHTTQ VPDSVGGFVY RTRRDELIIG KPRLGTILSS REYRQDALAV
SAVRVLPGAR YELQTIKTHL EQPRLHVYLG RKSCPLSAPM NPQIDKTSRN FHEAFQAYAH
QPLLPVHHSG KEGLSKRDAY WLGLANDRHY YWEGEPSEFS DTIDLSRVQT RIRHDQPLSR
TRWQFSPRQE HYWYFSGGE
|
|---|
| |