Gene Dole_2971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2971 
Symbol 
ID5695830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp3563253 
End bp3563927 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content60% 
IMG OID641265587 
Producthypothetical protein 
Protein accessionYP_001530851 
Protein GI158522981 
COG category[S] Function unknown 
COG ID[COG2121] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0546074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC GGTGGAAAAA ATTTCTTTAT TCCTGGCTGC TTCCCTATGT GGCCCTGATT 
GTGGTAAAGC TTCTTTCCCT GACCTTCCGG GTCGAGCGGA TCGGCGAAGA CCGGGAGCAG 
GCCCTTATAA AAAAGGACGG GGGCATCATC TACGCCTCCT GGCACCAGCG CTTTTTTCCG 
GGCATCGCCT TTTTCGCCAC ACGGAAACCC ATCACCATTA TGATCAGCCA GAGCAAGGAC 
GGCGAAATGG CGGCCCGCGT CGTCGCCATT CTGGGCTGGC TCCCGGTGCG GGGGTCGTCC 
ACCAGGGGAG GGAGAGAGGC CCTGGCTGAG ATCAAGCGGC TGTCTGGCAG CGGGTACAAG 
ATCGGCCATA TCGTGGACGG CCCCCAGGGG CCCTTCGGCG TGGTCAAAGC CGGGCTGCTG 
CGCATCGCCC AGGTGTCGGG CAAGGCCATT GTGCCCACCA TCACGTCGGC GGAAAAAAAG 
TGGGTGCTCA ACAGCTGGGA CCGGTTCATG GTGCCCAAGC CCTTTTCCCG GGTCAAGATT 
CGCTTCGGCG ATCCCATTTA TGTGCCGGCC GATCTTTCGG AAGATGCTTT TGAACAGAAG 
CGGCTGGAGG TGGAAAAGGC CATGTACGCG CTGTATGAAG ATACGGACCG GATGTGGCCC 
CAGGACCGGG CGTGA
 
Protein sequence
MKKRWKKFLY SWLLPYVALI VVKLLSLTFR VERIGEDREQ ALIKKDGGII YASWHQRFFP 
GIAFFATRKP ITIMISQSKD GEMAARVVAI LGWLPVRGSS TRGGREALAE IKRLSGSGYK 
IGHIVDGPQG PFGVVKAGLL RIAQVSGKAI VPTITSAEKK WVLNSWDRFM VPKPFSRVKI 
RFGDPIYVPA DLSEDAFEQK RLEVEKAMYA LYEDTDRMWP QDRA