Gene Dole_2969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2969 
Symbol 
ID5695828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp3561845 
End bp3562474 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content58% 
IMG OID641265585 
Productnitroreductase 
Protein accessionYP_001530849 
Protein GI158522979 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0000187798 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTTA AAGATGTCGT TTACGGCAGG CGGGCCGTCA ATTTTTTTGA CCCGGATCGC 
GATGTTCCCG ATGCCCTGCT GCGGGAAATC GTTGAAACGG CGGCCACGGC GCCGTCCGGG 
TTCAACATTC AGCCCTGGAG CCTGATGGTG TTAAGAAGCC GGGAGGAAAA ATTGCGGCTT 
CAGCAGCATG CGTGGAAACA GGAAAAGGTC AGCGAGGCCC CGGTGACCCT GATCGTGCTG 
GCCGACATGG AGGGGTGGAA GCCGGGCAAC CGGTTTGCGG AAAAAAACTT TGCCGAAATG 
GTCAAGGCCG GGGCCATGAC CGAAGACAAG CGGGAGTGGT TCGAGAACGC CTGCCAGACC 
CTGTACGGCG CCTCCGAGGC CCGGGGTGTG GCCTTTGCCT GCAAGAATAC CGCCTTTTTT 
GCCATGAACC TGATGCTGGC CGCCAAAAAC AAAGGCGTGG ACACCCATCC CATGGACGGT 
TTCGACCTAG ACGCGGTGCA CAAGGAGTTT GCGATTCCGG ACAACTACTG GATTCCCCTG 
CTGATCGCCG TGGGTTATTT CAGGGGCGAC AAGAAGCTGG ACCCGCCCAA GTGGCGCAAG 
ACCTATGACG AGATTGTCGT GAAGTTCTAA
 
Protein sequence
MDFKDVVYGR RAVNFFDPDR DVPDALLREI VETAATAPSG FNIQPWSLMV LRSREEKLRL 
QQHAWKQEKV SEAPVTLIVL ADMEGWKPGN RFAEKNFAEM VKAGAMTEDK REWFENACQT 
LYGASEARGV AFACKNTAFF AMNLMLAAKN KGVDTHPMDG FDLDAVHKEF AIPDNYWIPL 
LIAVGYFRGD KKLDPPKWRK TYDEIVVKF