Gene Dole_2965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2965 
Symbol 
ID5695824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp3559414 
End bp3560088 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content56% 
IMG OID641265581 
ProductTetR family transcriptional regulator 
Protein accessionYP_001530845 
Protein GI158522975 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0278757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCAGG CAAAACAGAC GCGCGGTCTG AGAAGAAACC TCAAGGAACA GCTGCGGCGT 
GACCAGATCA AGGAAGCGGC CATCAACCTG TTTTCCACCA AGGGTTACCA GCAGTCCACC 
ATGGAGGACC TGGCCGCGGA AGCCGGTGTG AGCAAGTCCC TGATTTACTG GTACTGGGAA 
GGCAAGGGCG CCCTGCTCTC CGAACTGGTA GACACCTGCA TGAACCGGTA TATCGACCTT 
CTGACCGATG CGGTCAACTC CGATGATCCT TTTATTGACA GGTTTTACCG GACCCTGTGG 
CAGTATCTTG AAATTTCCCG GCAGAGCGAC CGGCTTAACA AGCTGGTCCA TTTCTGTTCC 
CTTCACACCC CCAAAGACAA AAAGGAAGAT TTTGCCCGGC AGGTCAACAA CCACTACCGG 
AAAGTCCTGG ACCTGCTGGA AACGCTGATC AGCCAGGGGA TAAAGACAGG CTATCTGCCC 
TCGGCAACGG ACGGTCCGGC CATGGCCCTG GCCCTGCTCT CCCTGACCGA GGGTCATATC 
TACATGTCGA TCCTGGAAGA CCGCCTCTCC CTGGAGCGTG TCTACACCGG GATTTTCTTT 
CTGCTGTTTG ACGCCCGGCA AAAAAACGGG TCAGGAAAAG CGAATTCGGG TGCGGCCAGT 
GCCGCACCAT TATAA
 
Protein sequence
MAQAKQTRGL RRNLKEQLRR DQIKEAAINL FSTKGYQQST MEDLAAEAGV SKSLIYWYWE 
GKGALLSELV DTCMNRYIDL LTDAVNSDDP FIDRFYRTLW QYLEISRQSD RLNKLVHFCS 
LHTPKDKKED FARQVNNHYR KVLDLLETLI SQGIKTGYLP SATDGPAMAL ALLSLTEGHI 
YMSILEDRLS LERVYTGIFF LLFDARQKNG SGKANSGAAS AAPL