Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2965 |
Symbol | |
ID | 5695824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3559414 |
End bp | 3560088 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641265581 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001530845 |
Protein GI | 158522975 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0278757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCAGG CAAAACAGAC GCGCGGTCTG AGAAGAAACC TCAAGGAACA GCTGCGGCGT GACCAGATCA AGGAAGCGGC CATCAACCTG TTTTCCACCA AGGGTTACCA GCAGTCCACC ATGGAGGACC TGGCCGCGGA AGCCGGTGTG AGCAAGTCCC TGATTTACTG GTACTGGGAA GGCAAGGGCG CCCTGCTCTC CGAACTGGTA GACACCTGCA TGAACCGGTA TATCGACCTT CTGACCGATG CGGTCAACTC CGATGATCCT TTTATTGACA GGTTTTACCG GACCCTGTGG CAGTATCTTG AAATTTCCCG GCAGAGCGAC CGGCTTAACA AGCTGGTCCA TTTCTGTTCC CTTCACACCC CCAAAGACAA AAAGGAAGAT TTTGCCCGGC AGGTCAACAA CCACTACCGG AAAGTCCTGG ACCTGCTGGA AACGCTGATC AGCCAGGGGA TAAAGACAGG CTATCTGCCC TCGGCAACGG ACGGTCCGGC CATGGCCCTG GCCCTGCTCT CCCTGACCGA GGGTCATATC TACATGTCGA TCCTGGAAGA CCGCCTCTCC CTGGAGCGTG TCTACACCGG GATTTTCTTT CTGCTGTTTG ACGCCCGGCA AAAAAACGGG TCAGGAAAAG CGAATTCGGG TGCGGCCAGT GCCGCACCAT TATAA
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Protein sequence | MAQAKQTRGL RRNLKEQLRR DQIKEAAINL FSTKGYQQST MEDLAAEAGV SKSLIYWYWE GKGALLSELV DTCMNRYIDL LTDAVNSDDP FIDRFYRTLW QYLEISRQSD RLNKLVHFCS LHTPKDKKED FARQVNNHYR KVLDLLETLI SQGIKTGYLP SATDGPAMAL ALLSLTEGHI YMSILEDRLS LERVYTGIFF LLFDARQKNG SGKANSGAAS AAPL
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