Gene Dole_2955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2955 
Symbol 
ID5695814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3548099 
End bp3549349 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content57% 
IMG OID641265571 
ProductAAA family ATPase 
Protein accessionYP_001530835 
Protein GI158522965 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG ACCCTTTACA TCCCCGCTTT TTGATTCCCC GGGTTACCGA GGCGCTGGCG 
GATTCTCCCG TAGTGTTGAT TCATGGCCCG CGCCAAAGCG GGAAGACCAC ACTGGCCCGT
CTTGTGGGTG ACGCAGCCGG TTATGTCTAT ATCTCCTTTG ATAATGATGT GCAGCGAGCT
GCGGCTGAAT TCGACCCGGT CGGTTTTGTG GCCGATCTGC CCGACAAGGT GATTCTGGAT
GAGATCCAGC GGGTTCCGGG GCTGTTCACC TCACTTAAGG CGGCCGTGGA TTCACGGCGG
CAGGCCGGTC GATTTATCCT TACCGGCTCG GCCAATGTGC TGCTGGTGCC GAAACTGGCG
GATTCTCTGG CCGGGCGAAT GGAGATATTA AGGCTTCATC CCCTTGCCCA GTGCGAACTG
GCCGGCAGGG ATTCGGGTTT TCTATCGATT CTGTTGGGGC AGGGATTCAA AAAATCAAGC
ATCGGGAGCA GGCAGGGCCG TGACCTGGCC GAACGGATTG CGGCCGGTGG TTTTCCGGCC
GCGTTGGCCC GAACAGCCTC CCGCCGGCGA GCTGCATGGT ATCGGGACTA TATCGATACA
CTGGTGCAAC GGGATGTGCG TGACCTTTCC GCTATTCGTT CTCTGGAAGC ACTACCCCGC
CTCCTGGCCC TGGCCGCAGG GCAGACCGCA CACTTGGTGA ATGTGGCCGA ACTGTCCGGG
CCGTTCCAGT TGAGCCGGCC CACGATTCGT GACTACATGA CCCTGCTGGA ACGTTTGTTT
CTGCTGGAGC AGCTTCCCCC CTGGCACAAC AATCGCCTCA GCCGTCTGAT CAAGACGCCG
AAACTGCACC TCTGTGACAC CGGCCTGGCC TGCGCCCTTC TTGGCGTGGA CGGCCCATCC
CTTTGGGGCG ATCGCGAACT GTATGGGCAA TTACTGGAAA CCTTTGTTTA TCAGGAACTG
CGGCGTCAAA GCGGTTGGCA GGAAGAGCCG GTGACATTTT ATCATTACCG CGACAAGGAG
GGACTGGAAG TGGATGTGGT GCTGGAGTTC GGCGGCAGGC AACTGGCCGG AGTGGAAGTA
AAGGCTTCCT CAACGGTCGG CGCTTCTGAT TTTAGAGGCT TGATTCGTCT GCAAAAATCG
GTAGGTAAAC GGTTTGAGGC AGGGGTTGTT CTTTACGATG GAGACGCAAT CGTATCTTTT
GGTAAAGGGT TGTTTGCCGT GCCGATCTCG ATGCTGTGGG AAAAGACATG A
 
Protein sequence
MKKDPLHPRF LIPRVTEALA DSPVVLIHGP RQSGKTTLAR LVGDAAGYVY ISFDNDVQRA 
AAEFDPVGFV ADLPDKVILD EIQRVPGLFT SLKAAVDSRR QAGRFILTGS ANVLLVPKLA
DSLAGRMEIL RLHPLAQCEL AGRDSGFLSI LLGQGFKKSS IGSRQGRDLA ERIAAGGFPA
ALARTASRRR AAWYRDYIDT LVQRDVRDLS AIRSLEALPR LLALAAGQTA HLVNVAELSG
PFQLSRPTIR DYMTLLERLF LLEQLPPWHN NRLSRLIKTP KLHLCDTGLA CALLGVDGPS
LWGDRELYGQ LLETFVYQEL RRQSGWQEEP VTFYHYRDKE GLEVDVVLEF GGRQLAGVEV
KASSTVGASD FRGLIRLQKS VGKRFEAGVV LYDGDAIVSF GKGLFAVPIS MLWEKT