Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2932 |
Symbol | |
ID | 5695791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3525957 |
End bp | 3526691 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641265548 |
Product | nuclease |
Protein accession | YP_001530812 |
Protein GI | 158522942 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000967854 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCGT TCCGATTATA TCGGCTTGTT GTTGTAACAG TAGCCCTTTT TTTATGGTTC ACCACAGCCG CCTTTTCTGA GACTGTTATC ACCGGTAAGG TTGTCGGTAT AGCAGACGGA GACACCATCA CCGTCCTTCA GGATAAGACC CAATACAAGA TCAGGCTCTA TGGTATAGAC TGCCCTGAAT CCCACCAGAA CTTTGGCACC AGGGCAAAAC AGTTCGTATC GGACCTGATT TTTAATAAAG ACGTGAGGGT TATCGTCCAT GACACTGACA GATATGGCAG AAATGTAGGC CAAGTGTTTT ATAACGACCT TGATGTGAAC CAGGCCATGG TACAAGCCGG TTATGCCTGG GTATATCCGC AGTATTGTAA AAAGTCTTTC TGCAGCGCCT GGAATGGCTT TGAGCAGGCC GCACGGGAGA AGGGGATAGG TCTCTGGAGT CATCCAAACC CGGTTCCACC CTGGGATTTC AGGCGGGGTG TACGGGGAAG TTCAGCTGAA AAGAACAAAG ACACCAGCAA GAACCAAGAG GTGACTTATC ACGGTAATAC CAGTTCCATG GTGTTTCATC AGCCGGCCTG TAAACATTTT AATTGTAAAA ACTGTACGGC TGTTTTCCAG GATAGGGAAG AGGCAATAGA GGCGGGATAT CGGCCGTGTG GGGGGTGTCG ACCATCTGGC ATACACAATG CTTCCCTCAA AAACGCCGCT CGAGGAACAT ATTAA
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Protein sequence | MKAFRLYRLV VVTVALFLWF TTAAFSETVI TGKVVGIADG DTITVLQDKT QYKIRLYGID CPESHQNFGT RAKQFVSDLI FNKDVRVIVH DTDRYGRNVG QVFYNDLDVN QAMVQAGYAW VYPQYCKKSF CSAWNGFEQA AREKGIGLWS HPNPVPPWDF RRGVRGSSAE KNKDTSKNQE VTYHGNTSSM VFHQPACKHF NCKNCTAVFQ DREEAIEAGY RPCGGCRPSG IHNASLKNAA RGTY
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