| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2896 |
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| Symbol | |
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| ID | 5695754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3480519 |
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| End bp | 3481952 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641265511 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001530776 |
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| Protein GI | 158522906 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGAA ACAGAGGAAC CGCACTGACG CTAGCGGCCC TGCTGCTGGC TGGCTGCACA
CTGGCCCCCC GGTATGAACG GCCCCAGGCC CCGGTATCCG ACCAGTGGCC GGCGGGCCCG
GCCTATGTTC AGGAAGAGAC GGACGGCGCG GCTGCCGCCG CCGACCTTGC CATTGATGCT
TTTTTCACCG AGCCGCGCCT GGTCCAGGTC ATTGACATGG CCCTTGCCAG CAACCGGGAT
CTGCGCACCG CGGCCCTGAA CGTGGAGCGG GCACGGGCCT ATTACCGGAT TTCCCGGGCC
GAGCTGCTGC CGAAGATCAA CGCCACGGGC ACCGGCTACA AGGGCCGGGT GCCGGCCGAT
CTTTCCAGTT CCGGCAGCGC CATGACCGTT GAGGAGTACA ACGTTAACCT GGGCATCACC
GCCTGGGAGA TTGATCTTTT CGGCCGTATT CGCAGCCTCA AGGCCCGTGC CCTGGAAGAG
TTTCTGGCCA CGGAAGCGGC CCGCCGGGGC GCCAGAATAC TGCTGGTGTC GGAAACGGCG
GGCGCATGGC TGACCCTGGC CGCGGACACC GAGACCCTGG ATCTGGCCCA ATCCACCCTG
GCCACCCGCC AGGTGGCCCG CGATATGGTG GCCCGGCGGG TGGAGGTGGG GCTGGCCGCT
GAAATAGACC TGCACCAGGC CCAGACCCAG GTGGATGAAG CCAGAAGCGC GGTGGCCCGG
CTCACGGCCC AGGTGGCCAA GGACAGGAAT GCCCTGAACC TGCTGGCCGG GGGACCGGTG
CCGGAGGAAC TGCTGCCACG GTCCCTGGAC GAAATGACGG TCCTGCCCGA CCTGGCCGCC
GGAACCCCTT CGGAAATCCT GCTCAACCGC CCTGACATCC GCCAGGCGGA AAGCCGGCTC
AAGGCCGCCT ATGCCAACAT CGGCGCGGCC CGGGCCGCCT TTTTTCCTTC CATCACCCTG
ACCGGGACCC TGGGCACGGC CAGCAGCGAG CTGTCCGGCC TGTTTGACAC CGAGTCAGAC
ACCTGGAGCT TTGCGCCCAA AATCTCCATG CCGATTTTCG ATCCCCGCAC ATGGTCGGCC
CTGAAGGTGA CAAAGGTGGA CCGGGAGATC GCCCTGGCCC AGTACGAAAA GGCCATTCAG
ACCGCTTTTC GCGAGGTGGC CGATACCCTG GCAAGTCGGG GCACCCTTCA GGAACAGCTG
GACGCCCAGG CCTCCCTTGT AAGGGCCACC GCCGAAATCT GCCGCATTGC CCAGGCCCGG
TATGACGCCG GCGCCATGAT CTACCTGGGG GTTCTGGATG CCCAGCGCTC CCTGTACGCG
GCCCGGCAGG GCCTGATAGC CGTTCGCCTG GCAGATATGG CCAGCAGAAT ACGGCTCTAT
GCGGTGCTGG GCGGCGGGCA GACGACAGCG GAACCCCGGG AGGAAAACGA ATAA
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| Protein sequence | MMRNRGTALT LAALLLAGCT LAPRYERPQA PVSDQWPAGP AYVQEETDGA AAAADLAIDA
FFTEPRLVQV IDMALASNRD LRTAALNVER ARAYYRISRA ELLPKINATG TGYKGRVPAD
LSSSGSAMTV EEYNVNLGIT AWEIDLFGRI RSLKARALEE FLATEAARRG ARILLVSETA
GAWLTLAADT ETLDLAQSTL ATRQVARDMV ARRVEVGLAA EIDLHQAQTQ VDEARSAVAR
LTAQVAKDRN ALNLLAGGPV PEELLPRSLD EMTVLPDLAA GTPSEILLNR PDIRQAESRL
KAAYANIGAA RAAFFPSITL TGTLGTASSE LSGLFDTESD TWSFAPKISM PIFDPRTWSA
LKVTKVDREI ALAQYEKAIQ TAFREVADTL ASRGTLQEQL DAQASLVRAT AEICRIAQAR
YDAGAMIYLG VLDAQRSLYA ARQGLIAVRL ADMASRIRLY AVLGGGQTTA EPREENE
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