Gene Dole_2892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2892 
Symbol 
ID5695750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand+ 
Start bp3474572 
End bp3475255 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content58% 
IMG OID641265507 
ProductTetR family transcriptional regulator 
Protein accessionYP_001530772 
Protein GI158522902 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0741527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAA ATACAATTCA TTCCGATGAC ACAAAGACCC GCCTGATTCA GGCTGCCGGC 
GAGGAGTTTG CCGGCCACGG GTTCAAGGGG GCAACGGTGC GCGACATCTG CCGCCGGGCC 
GGTGCCCACG TGGGGGCTGT GAACTACCAC TTCGGAGACA AGGAGGGTCT CTACGAAGCG 
GTGCTGGACT ACTCTCACCG CATGGCGACA CAAAAGTATC CGCCCGACAT GGGCCTTGAC 
GGCAGGGCCG GGCCGGAAGA ACGGCTCTCC GCCTTTATCC GGTCCCTGCT GCTGCGCATT 
CTGGGAGAAG GCCTGCCCGC CTGGCACGGC AAGCTCATGG CCCAGGAGAT CGCCAACCCC 
ACCGGCCTGA TGAAACAGAT GATAAAAAAC TCCATCCGGC CCCTTCACAC CCACCTGTCC 
GGCATTGTCA GCGCCCTGTT TCAAAAAGAG GGGGTAACCG TGGAAACCGG CAGCCCTGCC 
CTTTTTCTGT GCACCATGAG CATCGTTGGC CAGTGCCTGC ACCATTTCAA GGCGAAAGAG 
GTTGTTGAAG CCCTGCGGCC AAAAAGCTTT GATCCGGCGA ATATTGAAAC CCTGGCCGAT 
CATGTCACCC TGTTTTCCAT CGGCGGCATT CGGGCACTGG CAAAACAGGA AAAAAGTAAA 
AAGGAGTTAC CATGGAATCC GTGA
 
Protein sequence
MEENTIHSDD TKTRLIQAAG EEFAGHGFKG ATVRDICRRA GAHVGAVNYH FGDKEGLYEA 
VLDYSHRMAT QKYPPDMGLD GRAGPEERLS AFIRSLLLRI LGEGLPAWHG KLMAQEIANP 
TGLMKQMIKN SIRPLHTHLS GIVSALFQKE GVTVETGSPA LFLCTMSIVG QCLHHFKAKE 
VVEALRPKSF DPANIETLAD HVTLFSIGGI RALAKQEKSK KELPWNP