Gene Dole_2855 details

Gene Information

• Locus tag: Dole_2855
• ID: 5695713
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 3441341
• End bp: 3442009
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 641265470
• Product: TPR repeat-containing protein
• Protein accession: YP_001530735
• Protein GI: 158522865

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.00000189993
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAAAA TCAGTCGCAT CTCCCTTGAG AGAAAACGGG AACTTGAAGA GCCGGACAAA 
TTCATGGTGT TTGTGGCAAG AGCCATGCAG CTTGCCCAGA CCTACAGAAA ACAGATCACC 
GCCATTATCG GCCTGGTGAT CGCGGTGGCC GTGGTAACCG GCGGGGTGTT CTACCTCGGC 
GCCCGGGCCG AGGTCAAGGC ATCGGATATG CTGGCTTCGG CCACGGCCCG GGCGGACGCC 
GCCGGGGCCG GCAGCACGGA TGAGTACAGG GCGGTTTACG AAACATACCC GCGCACCGTT 
GCCGGGCAGA TTGCCGGACT CCGTTATGCG GAACAGCTCT ACCGGTCCGG GGAAGCGGCG 
GCCGCCGTTG ATGTCTATAC AAAACTCGTT AAAAGCGTGG CCGGCAAACC GACCCTTCAC 
CACCTGGCCT TAAACGGTCT CGGCTATGCC CATGAAGCGG CCGGGGATCT GAAGGCCGCC 
GCCGACTGCT TTGAAACCAT CGCGGCCACA CCTGTGTCCG CCCACAAGGA GACGGCCCTC 
TTCAACCTGG CCCGCCTCTA TGAACAGGTG GGGGAAACGG AAAAAAGCCA AAAGGCCTTC 
GCTCAAATCG TGTCCGAATA CCCGGACTCC ATGTACGCGG ACATTGCCAG GGAAAAAAGC 
GCTTCCTGA 

 

Protein sequence

MAKISRISLE RKRELEEPDK FMVFVARAMQ LAQTYRKQIT AIIGLVIAVA VVTGGVFYLG 
ARAEVKASDM LASATARADA AGAGSTDEYR AVYETYPRTV AGQIAGLRYA EQLYRSGEAA 
AAVDVYTKLV KSVAGKPTLH HLALNGLGYA HEAAGDLKAA ADCFETIAAT PVSAHKETAL 
FNLARLYEQV GETEKSQKAF AQIVSEYPDS MYADIAREKS AS