| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2849 |
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| Symbol | |
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| ID | 5695707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3433011 |
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| End bp | 3434222 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641265464 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001530729 |
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| Protein GI | 158522859 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCTTT ATCTCTGGGA AGGAAAGCGA AAAGACCAGT CGACCCAGAA GGGCGAGATG
GAGGCCCCCA GCGAGGAGGC GGTCCGTGCC CAGCTTCAGC GGCAGAGAAT CACGCCGATA
AAAGTCAAGA AAAAACCAAA AGATCTGTTT GAAAACGTCG CCTTTCTTCA GCCCAGGGTC
AAGGAAGAGA ATGTTATTAT TTTTGCCCGC CAGTTCTCCA CCATGATCGA TGCCGGTCTG
CCCATTGTTC AGTGTCTGGA TATTCTTTTT TCCCAGGAGG ACAACCCCAC CTTCAGAAAG
ATTCTTAAAA GTATAAAGGA CAGCGTGGAA GGGGGCCAGA CCCTGGCCGA CGCCATGAAG
CCGTTTCCCG ATCAGTTTGA CAATCTGTTT GTCAACATGA TCGCCGCCGG TGAGGCCGGT
GGTATTCTGG ATGTCATTCT GAAGCGGCTC TCCGCTTACA TGGAAAAGGC GGCCAAGCTC
AAGCGGCAGG TCAAGGGTGC CATGATGTAC CCTCTGATCA CCCTGTCCAT TGCTGTTCTG
GTGGTGATCG TGATTCTGGT GTTCGTCATT CCGGTGTTTC AGGAGATGTT TGCCGATTTC
GGCAAAGAGC TGCCCGCCCC CACCCAGTTT GTCATTTTTC TTTCCGATAC GGTGAAATCC
CAGATTCATT TTATCATCAT CGCCTTTGTA CTGCTTGTCC TGGCCTACCG CCAGTTTTAC
AAGACGGAAA AGGGTCGCCT GTTCATGGAC GGCCTTTTTC TCAAGTTCCC CATTGTAGGT
ATTCTGCTCC GCAAGGTGGC GGTTGCCCGA TTCACTCGCA CCATGGGTAC CATGCTGGCC
AGCGGCGTCT CCATTCTGGA TGCTCTGGAT ATCGTGGCCC GCACCGCCGG CAACAAGGTG
GTGGAAAACG CGGTCTTCAA GGTCCGTTCC GGCATTTCCG AAGGCCGCAC CATGGCCGAT
CCCCTTCTGG AGAGCGGGGT CTTTCCGTCA ATGGTGTGCC AGATGATTTC CGTTGGCGAG
TCCACCGGCG CTCTGGATGC CATGCTGGAA AAGATCGCCG ATTTTTATGA AGAAGAGGTG
GATGCCGCCG TGGAAAGCCT GACCTCTGCC ATTGAGCCGC TGATGATGGT CTTCATGGGC
GGATTGATCG GCGGCCTGGT GGTCTCCATG TATCTGCCCG TCTTCCAACT GGCCGGCGCG
GTATCCGGCT AG
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| Protein sequence | MALYLWEGKR KDQSTQKGEM EAPSEEAVRA QLQRQRITPI KVKKKPKDLF ENVAFLQPRV
KEENVIIFAR QFSTMIDAGL PIVQCLDILF SQEDNPTFRK ILKSIKDSVE GGQTLADAMK
PFPDQFDNLF VNMIAAGEAG GILDVILKRL SAYMEKAAKL KRQVKGAMMY PLITLSIAVL
VVIVILVFVI PVFQEMFADF GKELPAPTQF VIFLSDTVKS QIHFIIIAFV LLVLAYRQFY
KTEKGRLFMD GLFLKFPIVG ILLRKVAVAR FTRTMGTMLA SGVSILDALD IVARTAGNKV
VENAVFKVRS GISEGRTMAD PLLESGVFPS MVCQMISVGE STGALDAMLE KIADFYEEEV
DAAVESLTSA IEPLMMVFMG GLIGGLVVSM YLPVFQLAGA VSG
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