Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2822 |
Symbol | |
ID | 5695680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3404356 |
End bp | 3405345 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641265437 |
Product | RluA family pseudouridine synthase |
Protein accession | YP_001530702 |
Protein GI | 158522832 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000591979 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCCGG ATAGAGACGT CGCCCTTGTG ACGAGTGCAG GGCACGACGG CCTGCGACTG GACACGCTGG TGGCCGGTCA GTGGGATTGT TCACGTCATT CAGCGGCCCT GCTGATCAAA AACGGCACTA TCCTTGTGGA CGGTCGGCCC CAGAAGCCTT CCTATAAAGT TGGCGTCAAC CAGTCCATAA CCGGTCGCAT TCCTTCACAA AAGCCGGAAA AGCCCGGCCC CGAGCCCGCC CCCCTGCCTC TCCTGTTTGA AGATGCGTTT CTGCTGGTTG TCAACAAGCC CCCCGGCCTT GTGGTGCACC CCGCCCCCGG CCATGAAGGG GGCACCCTGG TCAACCGCCT GCTGCACCAT TTTCCGGCCA TTGGCACCGT CGGTGAGCCT GACCGGCCGG GCATTGTCCA CCGTCTGGAC AGAAACACCT CCGGGGCCCT GGTGGTGGCC AAGACCGCGG CCGCCCATCA GGCGCTTTCC GACATGTTCA AATCCAGGCA GGTCCGCAAG ACCTACCTGG CTCTGGTATA CGGCCAAATG AAATCGACCG GCGGCGTTGT CACCCTGCCC ATCGGCCGGC ACTCCCTGGA AAGAAAAAAA ATGTCGGTTT CAAGCCCTCA GGCCCGGCCA GCGGAAACTC GCTGGAAAGT GCGCAAGGCC TTTGTCGATG CCAGTCTGCT GGAGCTTGAA ATTCACACCG GCCGGACCCA CCAGATCCGG GTCCACTGTA CGGCGCTGCA ACGGCCGGTG GTGGGAGACC CCACCTACCC GTGCAAATGG ACCCGGAAAC GGCAGCACTT TTCCAGCCGG GCCTCTTTTG AGCTGCTCAA TGCCGCCGGC CGGCAGATGC TTCACGCGTG GCGACTTGAA TTTGATCATC CCGTTACCGG CGCACCCATG TGCTTTACAG CACCGCTTTT CGAAGATATA AAAGAGATGC TCCACCTGCT CAGGGCCATT GACGGCACAA CAGCACCAAA AAGAGCCTGA
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Protein sequence | MPPDRDVALV TSAGHDGLRL DTLVAGQWDC SRHSAALLIK NGTILVDGRP QKPSYKVGVN QSITGRIPSQ KPEKPGPEPA PLPLLFEDAF LLVVNKPPGL VVHPAPGHEG GTLVNRLLHH FPAIGTVGEP DRPGIVHRLD RNTSGALVVA KTAAAHQALS DMFKSRQVRK TYLALVYGQM KSTGGVVTLP IGRHSLERKK MSVSSPQARP AETRWKVRKA FVDASLLELE IHTGRTHQIR VHCTALQRPV VGDPTYPCKW TRKRQHFSSR ASFELLNAAG RQMLHAWRLE FDHPVTGAPM CFTAPLFEDI KEMLHLLRAI DGTTAPKRA
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