Gene Dole_2822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2822 
Symbol 
ID5695680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3404356 
End bp3405345 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content61% 
IMG OID641265437 
ProductRluA family pseudouridine synthase 
Protein accessionYP_001530702 
Protein GI158522832 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000591979 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCCGG ATAGAGACGT CGCCCTTGTG ACGAGTGCAG GGCACGACGG CCTGCGACTG 
GACACGCTGG TGGCCGGTCA GTGGGATTGT TCACGTCATT CAGCGGCCCT GCTGATCAAA
AACGGCACTA TCCTTGTGGA CGGTCGGCCC CAGAAGCCTT CCTATAAAGT TGGCGTCAAC
CAGTCCATAA CCGGTCGCAT TCCTTCACAA AAGCCGGAAA AGCCCGGCCC CGAGCCCGCC
CCCCTGCCTC TCCTGTTTGA AGATGCGTTT CTGCTGGTTG TCAACAAGCC CCCCGGCCTT
GTGGTGCACC CCGCCCCCGG CCATGAAGGG GGCACCCTGG TCAACCGCCT GCTGCACCAT
TTTCCGGCCA TTGGCACCGT CGGTGAGCCT GACCGGCCGG GCATTGTCCA CCGTCTGGAC
AGAAACACCT CCGGGGCCCT GGTGGTGGCC AAGACCGCGG CCGCCCATCA GGCGCTTTCC
GACATGTTCA AATCCAGGCA GGTCCGCAAG ACCTACCTGG CTCTGGTATA CGGCCAAATG
AAATCGACCG GCGGCGTTGT CACCCTGCCC ATCGGCCGGC ACTCCCTGGA AAGAAAAAAA
ATGTCGGTTT CAAGCCCTCA GGCCCGGCCA GCGGAAACTC GCTGGAAAGT GCGCAAGGCC
TTTGTCGATG CCAGTCTGCT GGAGCTTGAA ATTCACACCG GCCGGACCCA CCAGATCCGG
GTCCACTGTA CGGCGCTGCA ACGGCCGGTG GTGGGAGACC CCACCTACCC GTGCAAATGG
ACCCGGAAAC GGCAGCACTT TTCCAGCCGG GCCTCTTTTG AGCTGCTCAA TGCCGCCGGC
CGGCAGATGC TTCACGCGTG GCGACTTGAA TTTGATCATC CCGTTACCGG CGCACCCATG
TGCTTTACAG CACCGCTTTT CGAAGATATA AAAGAGATGC TCCACCTGCT CAGGGCCATT
GACGGCACAA CAGCACCAAA AAGAGCCTGA
 
Protein sequence
MPPDRDVALV TSAGHDGLRL DTLVAGQWDC SRHSAALLIK NGTILVDGRP QKPSYKVGVN 
QSITGRIPSQ KPEKPGPEPA PLPLLFEDAF LLVVNKPPGL VVHPAPGHEG GTLVNRLLHH
FPAIGTVGEP DRPGIVHRLD RNTSGALVVA KTAAAHQALS DMFKSRQVRK TYLALVYGQM
KSTGGVVTLP IGRHSLERKK MSVSSPQARP AETRWKVRKA FVDASLLELE IHTGRTHQIR
VHCTALQRPV VGDPTYPCKW TRKRQHFSSR ASFELLNAAG RQMLHAWRLE FDHPVTGAPM
CFTAPLFEDI KEMLHLLRAI DGTTAPKRA