Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2817 |
Symbol | |
ID | 5695675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3399258 |
End bp | 3400211 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641265432 |
Product | ribose-phosphate pyrophosphokinase |
Protein accession | YP_001530697 |
Protein GI | 158522827 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00466763 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGGAAC CAAACAACGA TTTTAAAATT TTTTCGGGAA ACGCAAATCC CGGGCTGGTG GAAAAAATCT GCGCGTACCT GGGCCGGCCC CTGGGAAAGG CCAAGGTCTC CCGGTTCAGC GACGGCGAGG TCCAGATCGA AATCAACGAA AACGTCCGGC GCAAGGACGT GTTTCTGATC CAGTCCACCT GCGCGCCGGT CAACGATAAC CTGGTGGAAC TGCTGCTGAT GCTTGATGCG CTCAAACGCT CCTCGGTCAG CAAGATCACC GCGGTGATTC CCTATTACGG ATATGCCCGC CAGGACAAAA AGGTAGCGCC CCGGGTGCCG ATCAGCGCCA AGCTGGTGGC GGACCTGCTC ACCCAGGCCG GTGCCAACAA GATCATCACC CTGGACCTGC ATGCCGGCCA GATTCAGGGC TTTTTCAATG TGCCGGTAGA CAACCTGTTC GCGGCCCCGG TGCTGATCAC CCACATTAAA AAACACTTTT CCCCCGACAA CCTGGTCATT GTCTCTCCCG ACGCCGGCGG TGTGGAGCGG GCACGGGCCT TTGCCAAGCG ACTGGACGCG GAACTGGCCA TTGTGGACAA GCGCCGCTCC GCTCCCAACC AGGCCCAGGC CATGGCGGTC ATCGGTGACG TCAAGGATAA AATCGCGATT ATTTTAGACG ACATGGTGGA CACCGCCGGC ACTCTGACCG AGGCGGCGGC GGCCCTGGAC GCCAAGGGCG CCAGGGAAGT GAATGCCTGC TGCGTGCATC CGGTGCTGTC CGGCCCGGCG GTGGACCGCA TCACCGGCTC CAAACTCAAA CAGATTATCG TCACCGACAC GGTGCCGCTG AATGAAAATG CGAAACAGTG CAACAAAATA GAGGTCCTCT CCATCGCCGA CCTGGTGGGA GAGGCCATGA TACGAAGCTA CAGGGGCGAT TCGGTCACCT CTCTTTTTGT ATAG
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Protein sequence | MKEPNNDFKI FSGNANPGLV EKICAYLGRP LGKAKVSRFS DGEVQIEINE NVRRKDVFLI QSTCAPVNDN LVELLLMLDA LKRSSVSKIT AVIPYYGYAR QDKKVAPRVP ISAKLVADLL TQAGANKIIT LDLHAGQIQG FFNVPVDNLF AAPVLITHIK KHFSPDNLVI VSPDAGGVER ARAFAKRLDA ELAIVDKRRS APNQAQAMAV IGDVKDKIAI ILDDMVDTAG TLTEAAAALD AKGAREVNAC CVHPVLSGPA VDRITGSKLK QIIVTDTVPL NENAKQCNKI EVLSIADLVG EAMIRSYRGD SVTSLFV
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