| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2812 |
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| Symbol | |
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| ID | 5695669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3392971 |
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| End bp | 3394458 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641265426 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001530692 |
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| Protein GI | 158522822 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAACCG ATGCGCAAAA AGAACTGTTA ATCAAGTCCA TTGATGCGTC CCAGCGGAAG
TTTTTTATCA TCTCTCCGGA CTATACCATT CTGGTGGCCA ACACCTTTAC CGGGCTGCTG
GTGGGAGAAC CCCTGGAGGG CAAAAAATGC TACGAGGTGT TCTGCAACCG GGATACGCCC
TGCCAGACCT GCATGGCCAG CGAGGTGCTG CGCAGCAAGC GGCCGGCCCT GTCCGGCGTG
ACCCGGGGCA CTTTTGAGAT CGCCGGCGAC GGGTCGTGCT TTTACTCCTA TCCCATTTTT
GACGGGGACC GCATTGAAGC CCTGGTGATG ATTGATTTCG ACGTTACCGT GCTGGGCGAG
ATTCGAGGCC GGCTGGAGAT GTCCAACGCC TTCTTGCGCA ACCTGATCTT AAGTTCCGTG
GACGGCGTGA TCGCCGCGGA TAAAACCGGC AAGGTGATCA TCTTCAACGA GGCCGCTTCC
GAGATCTCGG GCTACACGGT GGACGAGGCG CTAAACAGCC TGGATATTCG CAACATCTAT
CCGGGTGACG GGGCCCGTGA GATCATGCGA ATGATGCGCA GCCCGGACCA TGGCGGCGAA
GGCAAACTCA AGTCCTTTCA GGTGGACGCC CTGAGAAAGG ACGGGGGCAC GGTGCCCATC
CTGTTGAACG CTTCCATTGT GTACGAGGGG GAAAAGGAGA TCGCCTCCAT CGGGTTTTTT
CATGACATGA CCGAGGACCT GCGCATCAAG GCCGACCTTC AGAAGACCCA GACCCAGCTT
CTGCAGGCCG AAAAGATGTC CTCCCTGGGC AAGCTGGCCG CGGGCGTGGC CCACCAGCTC
AACAACCCCC TGGGTGGCAT CATGCTGTAC GCCAAGCTGC TGCTGGAGGA CTATGACCTG
AGCAGGGAGG TCACCGAGGA TATTCATCGC ATTCTGCGGG ACGCCCAGCG CAGCAGCGAC
ATCGTGCGGG AGTTGCTGGA GTTCGCCCGC CAGACCCGCC AGCAGCGGAC CATGGTGGAT
GTGAACCAGA GCGTGGCCCG TACCCTGTTT CTGCTTGAAA ACCAGACCCT GTTTCATGAC
ATCACCATTG AGAAGCGGTT TGCCGACACG GCCCTGTGGG TGGATGCGGA CGTGCAGCAG
CTCAATCACG TGTTCATGAA TATTATTCTC AACGCGGCCC AGGCCATGGA AGGCAAGGGC
GAGCTGACCA TCACCACCGG CGCGTCGGCC ATGGGCGAAA TGGTGACGGT GGAGATCGCC
GACACCGGCC CCGGTATTCC GGCCGACACC CTGCCCCGTA TCTTTGAGCC TTTTTATACG
ACCAAGGACG AGGGCAAGGG CACGGGCCTG GGCCTGAGCC TGGTTTACAG CATTATTGAT
GATCACGGCG GACGGGTGTC CGCCGCCAAC AAACCTGAAC GGGGCGCTGT TTTCAGAGTG
GAGCTGCCGG CCTATTCGGG ACAAGGAGAG GACGAGAGTG GACGATAG
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| Protein sequence | MRTDAQKELL IKSIDASQRK FFIISPDYTI LVANTFTGLL VGEPLEGKKC YEVFCNRDTP
CQTCMASEVL RSKRPALSGV TRGTFEIAGD GSCFYSYPIF DGDRIEALVM IDFDVTVLGE
IRGRLEMSNA FLRNLILSSV DGVIAADKTG KVIIFNEAAS EISGYTVDEA LNSLDIRNIY
PGDGAREIMR MMRSPDHGGE GKLKSFQVDA LRKDGGTVPI LLNASIVYEG EKEIASIGFF
HDMTEDLRIK ADLQKTQTQL LQAEKMSSLG KLAAGVAHQL NNPLGGIMLY AKLLLEDYDL
SREVTEDIHR ILRDAQRSSD IVRELLEFAR QTRQQRTMVD VNQSVARTLF LLENQTLFHD
ITIEKRFADT ALWVDADVQQ LNHVFMNIIL NAAQAMEGKG ELTITTGASA MGEMVTVEIA
DTGPGIPADT LPRIFEPFYT TKDEGKGTGL GLSLVYSIID DHGGRVSAAN KPERGAVFRV
ELPAYSGQGE DESGR
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