| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2779 |
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| Symbol | |
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| ID | 5695636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3353790 |
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| End bp | 3355019 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641265393 |
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| Product | L,L-diaminopimelate aminotransferase |
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| Protein accession | YP_001530659 |
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| Protein GI | 158522789 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03542] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0363182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAGA TCAACGAACA CTTTTTAAAA CTCCAGTCCT CCTACCTGTT TTCAGAAATC
GCCAAACGGG TAAACGCCCA CCAGGCAACC CATCCCGACC AGTCCATCAT CAAGCTGGGC
ATCGGCGACG CCACGCAGCC CCTGTGTCCG GCCTGCCTGG ACGCCTTTCA TAAAGCCGTG
GATGAAATGG GTACGGCATC CTCTTTTCGC GGGTACGGGC CGGAGCAGGG ATACGCGTTT
TTGAGGGAAG CCGTCGCGGC CAACGATTAC CAGGCCCGGG GTGCCGACAT TCAACCCGAC
GAGGTGTTTA TCAGCGACGG GGCCAAGTGC GACACCGGCA ATTTTCAGGA GCTGTTTGCC
ACAGACATTC GGGTCGCCAT TCCCGACCCG GTCTACCCGG TCTACCTGGA CACCAATGTC
ATGGCCGGCC GCACCGGGGC CTTTGAAAAC GGCCGTTACG GCAACATCGT TTACATGGAG
TGCACCGCGC AAAACAGTTT TCTGCCGGCC ATTCCCAAAG AGCCGGCAGA CCTGGTCTAC
CTCTGCTTTC CCAACAACCC CACCGGCGCC GTGGCCACAA AGGAATACCT TCAGGCATGG
GTGGACTGGG CTCTGGATGC AAAGGCCCTG ATCCTTTTTG ACGCCGCCTA CGAGGCCTTT
ATCCGTGACC CGTCCATTCC TAAGACGATT TATGAGATTC CGGGCGCCCG CAAGGTGGCG
GTGGAGTTTC GCAGCTTTTC CAAAACCGCC GGGTTCACCG GCACCCGGTG CGCCTTTTCC
GTGGTGCCAA AAGAGTGCAT GGCCTACGAC ACCAGCGGCA AGGCCCACGC ACTGCACGCA
TTGTGGAACC GGCGTCACTG CACCAAGTTC AACGGCGTCT CCTACCCGGT GCAGCGGGCC
GCTGAAGCCG TTTACAGCCC CGAGGGCAAG GCCCAGGCAA AAGAGATGAT TCGCACCTAC
ATGGCCAATG CCGACAGAAT TACCGCGGCC ATGGCCGGCA TGGGCTTTTC CTACGTGGGC
GGGGACCATT CGCCCTATAT CTGGGTGGAC ACGAAAACCG ATTCCTGGGC GTTTTTTGAT
ACCCTGCTGA CAAAGGCCGG GGTGGTGTGT ACCCCGGGCG GGGGATTTGG AAAGTGCGGC
GCACAGTATA TCCGCCTGTC GGCATTTAAC AGCTACGCCA ATGTGGATGC GGCCATGAAG
CGCATGGCAG AGGTTTTTGG GAAGGCGTAA
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| Protein sequence | MIKINEHFLK LQSSYLFSEI AKRVNAHQAT HPDQSIIKLG IGDATQPLCP ACLDAFHKAV
DEMGTASSFR GYGPEQGYAF LREAVAANDY QARGADIQPD EVFISDGAKC DTGNFQELFA
TDIRVAIPDP VYPVYLDTNV MAGRTGAFEN GRYGNIVYME CTAQNSFLPA IPKEPADLVY
LCFPNNPTGA VATKEYLQAW VDWALDAKAL ILFDAAYEAF IRDPSIPKTI YEIPGARKVA
VEFRSFSKTA GFTGTRCAFS VVPKECMAYD TSGKAHALHA LWNRRHCTKF NGVSYPVQRA
AEAVYSPEGK AQAKEMIRTY MANADRITAA MAGMGFSYVG GDHSPYIWVD TKTDSWAFFD
TLLTKAGVVC TPGGGFGKCG AQYIRLSAFN SYANVDAAMK RMAEVFGKA
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