Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2774 |
Symbol | |
ID | 5695631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3346281 |
End bp | 3347411 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641265388 |
Product | 2-hydroxyglutaryl-CoA dehydratase D-component |
Protein accession | YP_001530654 |
Protein GI | 158522784 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAGAA AGACCCCCAC CCCCTTTGAT GCCCTGCTGG AGGAGCCGGT CAACAGCCTG GCCGAGCAGG CCATGGACGA AGGCCGCATT GCCATCGGCT ACACATGCAG TTACGTGCCG TCGGTTCTGC TGTCGGTGCC ACCCCTGTTT CCCTTGCGCC TGCGGGCCCC CGGCGCCGCC GGCACCGAGC TGGCTGACAT CTACATGTCC AACCTCACCT GCTCCTACAC CCGCAGCCTG CTTGAGTTTG CCATGGACTA CCGCTACCAG GCCCTGGGGG GTTTTGTTCA TACCGCCGGG TGTGACCACA TGCGGCGGCT TCACGACAAC CTGACCTACC TGATGCCGCC GTCCTTTAGC CATATTCTGG ACATTCCCCA CCGGACCGGC GAAGAGGGCC TGGCCTGGTA CAGGCAGGAC ATAAAGGCCC TGGCTGAAAA ACTGGAAAGC CATTTCGGCG TCTCCATGTC TTCAGACGCC CTGAAGGCCG CCATTGCCGA CCACAACCTT CTGATAAAAA AGATACAGGC CGTCTCCGAC CTGCGCAAGG CCGAGCAGCC GGTGATTTCC GGTGCCGAAT TTCACTGCCT GCTGATGGCG GCCGTCACCT CGCCGGCCCA CCTGATCGGT CCCCGGATCG ACACCTTTTT TGATCACCTG GCCCAGAGGC CGCCCATTGA GGATGCGCGG GCCCGGCTGA TGATCGTGGG GGGCCAGATG GACAACCCCC GGTTTATCGA GACCATCGAA TCCGCCGGCG CCCTGGTGGT GGCGGACCGC ACCTGCACCG GGTCCCTTTT CGGCGCCGCC CCCATTGATG AGACGGAAGC CGATCCCCTG GACGCCATTG CCCGTCACGG GCTTTTTTCT CCGGGTTGCC CCCGCATGAT GGAAGATTTT GACCGGCGGC TTTCCCGCAT TCTTGAAGCG GCAAAAGCAT TCCGCGTTGA CGGGATCATC GTTGAGTTTA TCAAATTTTG CGACACCTGG GGCGTGGAAG CCGCCTCCCT GGTGCCGGCC CTGCGAGATG CCGGCTTTCG GGTCCTCTCC CTGGAAAGAG AGTATGCCGC CACCGGCATG GGCCAGCTTC AGACACGCAT TCAGGCCTTT CTGGAAAGCA TGGGAAAATA A
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Protein sequence | MPRKTPTPFD ALLEEPVNSL AEQAMDEGRI AIGYTCSYVP SVLLSVPPLF PLRLRAPGAA GTELADIYMS NLTCSYTRSL LEFAMDYRYQ ALGGFVHTAG CDHMRRLHDN LTYLMPPSFS HILDIPHRTG EEGLAWYRQD IKALAEKLES HFGVSMSSDA LKAAIADHNL LIKKIQAVSD LRKAEQPVIS GAEFHCLLMA AVTSPAHLIG PRIDTFFDHL AQRPPIEDAR ARLMIVGGQM DNPRFIETIE SAGALVVADR TCTGSLFGAA PIDETEADPL DAIARHGLFS PGCPRMMEDF DRRLSRILEA AKAFRVDGII VEFIKFCDTW GVEAASLVPA LRDAGFRVLS LEREYAATGM GQLQTRIQAF LESMGK
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