Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2769 |
Symbol | |
ID | 5695626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3340980 |
End bp | 3342119 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641265383 |
Product | 2-hydroxyglutaryl-CoA dehydratase D-component |
Protein accession | YP_001530649 |
Protein GI | 158522779 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAATT CTTTCTACGA GGCCACCACC ACGGTTTGCA ACCAGTCGAT TCAGGAATGG CAGTCGTCCG GAAAAAAAAT CGTCGGCTAT ACCTGCTCCT ATGTTCCCCC GGAAATATTT CACGCCGCCG GGATTCTGCC GGTTCGCATC CGGGGCATTG AAACCGAAGG AACGGATATC GGCGACGCCT ATTTCGGACC TTTTATCTGT TCGTTTCCCA AGTGCATCCT GCAACTGGCC GGCAAGGGCA AATACAACTT TTTAAGCGGC GTCATCATCA CGCCCGGATG CGACGCCATG CGCCGCCTGG ACGAGTGCTG GCGCAAAGCC GGAGAAGACT ACCCGGGAAT CGTGCCGCCC TTTTTCTACT ATTTCGATGT CCCCCACAAG ACACTGCCCC ACGGCATGAA ATGGTTCAAG GAAGAGCTTC TGACCCTTAT CGCCGGGGTG GAGCAGCACT TTTCCGTCAC CGTCGACACC GACGGGCTGC ACCAGGCCAT CGCCCTTTAC AACCGGGGCC GGATGCTGCT CAAGGAGCTG GAGGAGATAC GCACCCGGCC GGAAGTCCCC ATCACCGGAA CCGAGGCCTT TGCCGTGGCC GTGGCCGGAA CGGTTCTGCC CCGGGACCTG TATACGGAGC AGCTGCAACA GCTCCTGGAA GACCTGAAAA CCCGGCCTTC GGTATCGACC GGCAAAAAAC GGATTCTGGT CATCGGCAGC ATCAGCGACG ACATTCAGAT CGTGGAACTG ATCGAAAAAA ACCCCACCGC CATCGTGGTG GCGGAAAACC TCTGCTTCGG CGTACGTTAC GAGGGCAACC TGGTGGCCGA GACCGGAGAC CCGGTGGAGG CCATGGCCGA GGGCTACCTG GGAGAGTGCA CCTGCCCCCG CATGTTCGGC AAATACCAGG AGCGATTGGC GATCCTGAAG GCGAAAATCG ACGCGGCCGC CATTGACGGC GTGATCATGC AGAACATCCG GTTCTGCGAC CTGCACGGTT CGGAACACGG TCTTCTGGAG CGCGACCTTG AAAAGGCGGG CATCCCCTGC CTGAAGATCG AGCGGGAATA CGGACCGCTC ACGGACACCG GCCGCATGCA GATGCGCATC CAGGCGTTTT TGGAAAGAAT CTCAACCTAA
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Protein sequence | MTNSFYEATT TVCNQSIQEW QSSGKKIVGY TCSYVPPEIF HAAGILPVRI RGIETEGTDI GDAYFGPFIC SFPKCILQLA GKGKYNFLSG VIITPGCDAM RRLDECWRKA GEDYPGIVPP FFYYFDVPHK TLPHGMKWFK EELLTLIAGV EQHFSVTVDT DGLHQAIALY NRGRMLLKEL EEIRTRPEVP ITGTEAFAVA VAGTVLPRDL YTEQLQQLLE DLKTRPSVST GKKRILVIGS ISDDIQIVEL IEKNPTAIVV AENLCFGVRY EGNLVAETGD PVEAMAEGYL GECTCPRMFG KYQERLAILK AKIDAAAIDG VIMQNIRFCD LHGSEHGLLE RDLEKAGIPC LKIEREYGPL TDTGRMQMRI QAFLERIST
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