Gene Dole_2769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2769 
Symbol 
ID5695626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3340980 
End bp3342119 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content59% 
IMG OID641265383 
Product2-hydroxyglutaryl-CoA dehydratase D-component 
Protein accessionYP_001530649 
Protein GI158522779 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAATT CTTTCTACGA GGCCACCACC ACGGTTTGCA ACCAGTCGAT TCAGGAATGG 
CAGTCGTCCG GAAAAAAAAT CGTCGGCTAT ACCTGCTCCT ATGTTCCCCC GGAAATATTT
CACGCCGCCG GGATTCTGCC GGTTCGCATC CGGGGCATTG AAACCGAAGG AACGGATATC
GGCGACGCCT ATTTCGGACC TTTTATCTGT TCGTTTCCCA AGTGCATCCT GCAACTGGCC
GGCAAGGGCA AATACAACTT TTTAAGCGGC GTCATCATCA CGCCCGGATG CGACGCCATG
CGCCGCCTGG ACGAGTGCTG GCGCAAAGCC GGAGAAGACT ACCCGGGAAT CGTGCCGCCC
TTTTTCTACT ATTTCGATGT CCCCCACAAG ACACTGCCCC ACGGCATGAA ATGGTTCAAG
GAAGAGCTTC TGACCCTTAT CGCCGGGGTG GAGCAGCACT TTTCCGTCAC CGTCGACACC
GACGGGCTGC ACCAGGCCAT CGCCCTTTAC AACCGGGGCC GGATGCTGCT CAAGGAGCTG
GAGGAGATAC GCACCCGGCC GGAAGTCCCC ATCACCGGAA CCGAGGCCTT TGCCGTGGCC
GTGGCCGGAA CGGTTCTGCC CCGGGACCTG TATACGGAGC AGCTGCAACA GCTCCTGGAA
GACCTGAAAA CCCGGCCTTC GGTATCGACC GGCAAAAAAC GGATTCTGGT CATCGGCAGC
ATCAGCGACG ACATTCAGAT CGTGGAACTG ATCGAAAAAA ACCCCACCGC CATCGTGGTG
GCGGAAAACC TCTGCTTCGG CGTACGTTAC GAGGGCAACC TGGTGGCCGA GACCGGAGAC
CCGGTGGAGG CCATGGCCGA GGGCTACCTG GGAGAGTGCA CCTGCCCCCG CATGTTCGGC
AAATACCAGG AGCGATTGGC GATCCTGAAG GCGAAAATCG ACGCGGCCGC CATTGACGGC
GTGATCATGC AGAACATCCG GTTCTGCGAC CTGCACGGTT CGGAACACGG TCTTCTGGAG
CGCGACCTTG AAAAGGCGGG CATCCCCTGC CTGAAGATCG AGCGGGAATA CGGACCGCTC
ACGGACACCG GCCGCATGCA GATGCGCATC CAGGCGTTTT TGGAAAGAAT CTCAACCTAA
 
Protein sequence
MTNSFYEATT TVCNQSIQEW QSSGKKIVGY TCSYVPPEIF HAAGILPVRI RGIETEGTDI 
GDAYFGPFIC SFPKCILQLA GKGKYNFLSG VIITPGCDAM RRLDECWRKA GEDYPGIVPP
FFYYFDVPHK TLPHGMKWFK EELLTLIAGV EQHFSVTVDT DGLHQAIALY NRGRMLLKEL
EEIRTRPEVP ITGTEAFAVA VAGTVLPRDL YTEQLQQLLE DLKTRPSVST GKKRILVIGS
ISDDIQIVEL IEKNPTAIVV AENLCFGVRY EGNLVAETGD PVEAMAEGYL GECTCPRMFG
KYQERLAILK AKIDAAAIDG VIMQNIRFCD LHGSEHGLLE RDLEKAGIPC LKIEREYGPL
TDTGRMQMRI QAFLERIST